Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC163A0A0D9SF12 ESRRAP1-201ENST00000400596 1257 ntBASIC21.37■■□□□ 1.01
CCDC163A0A0D9SF12 BX276092.2-201ENST00000417668 665 ntBASIC21.37■■□□□ 1.01
CCDC163A0A0D9SF12 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.37■■□□□ 1.01
CCDC163A0A0D9SF12 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.37■■□□□ 1.01
CCDC163A0A0D9SF12 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC163A0A0D9SF12 AC016405.3-201ENST00000607710 860 ntBASIC21.37■■□□□ 1.01
CCDC163A0A0D9SF12 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CCDC163A0A0D9SF12 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC163A0A0D9SF12 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC163A0A0D9SF12 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CCDC163A0A0D9SF12 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC163A0A0D9SF12 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC163A0A0D9SF12 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC163A0A0D9SF12 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC163A0A0D9SF12 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC163A0A0D9SF12 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.36■■□□□ 1.01
CCDC163A0A0D9SF12 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.36■■□□□ 1.01
CCDC163A0A0D9SF12 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC163A0A0D9SF12 OR7E47P-201ENST00000546390 1422 ntBASIC21.36■■□□□ 1.01
CCDC163A0A0D9SF12 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CCDC163A0A0D9SF12 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC163A0A0D9SF12 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC163A0A0D9SF12 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC163A0A0D9SF12 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC163A0A0D9SF12 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC163A0A0D9SF12 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CCDC163A0A0D9SF12 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC163A0A0D9SF12 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC163A0A0D9SF12 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC163A0A0D9SF12 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC163A0A0D9SF12 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
CCDC163A0A0D9SF12 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC163A0A0D9SF12 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.34■■□□□ 1.01
CCDC163A0A0D9SF12 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.34■■□□□ 1.01
CCDC163A0A0D9SF12 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC163A0A0D9SF12 AC008175.2-201ENST00000612840 297 ntBASIC21.34■■□□□ 1.01
CCDC163A0A0D9SF12 LINC01960-201ENST00000563759 1884 ntBASIC21.34■■□□□ 1.01
CCDC163A0A0D9SF12 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCDC163A0A0D9SF12 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC163A0A0D9SF12 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC163A0A0D9SF12 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CCDC163A0A0D9SF12 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CCDC163A0A0D9SF12 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CCDC163A0A0D9SF12 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.33■■□□□ 1.01
CCDC163A0A0D9SF12 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
CCDC163A0A0D9SF12 AC091874.3-201ENST00000512672 1195 ntBASIC21.33■■□□□ 1.01
CCDC163A0A0D9SF12 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC163A0A0D9SF12 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC163A0A0D9SF12 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC163A0A0D9SF12 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC163A0A0D9SF12 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.33■■□□□ 1
CCDC163A0A0D9SF12 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CCDC163A0A0D9SF12 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.33■■□□□ 1
CCDC163A0A0D9SF12 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.33■■□□□ 1
CCDC163A0A0D9SF12 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.32■■□□□ 1
CCDC163A0A0D9SF12 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC163A0A0D9SF12 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CCDC163A0A0D9SF12 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC163A0A0D9SF12 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.32■■□□□ 1
CCDC163A0A0D9SF12 POU5F1P4-201ENST00000413175 1085 ntBASIC21.32■■□□□ 1
CCDC163A0A0D9SF12 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.32■■□□□ 1
CCDC163A0A0D9SF12 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.32■■□□□ 1
CCDC163A0A0D9SF12 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.32■■□□□ 1
CCDC163A0A0D9SF12 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC163A0A0D9SF12 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.32■■□□□ 1
CCDC163A0A0D9SF12 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC163A0A0D9SF12 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC163A0A0D9SF12 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC163A0A0D9SF12 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC163A0A0D9SF12 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CCDC163A0A0D9SF12 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 AP006587.3-201ENST00000525742 1516 ntBASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC163A0A0D9SF12 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC163A0A0D9SF12 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC163A0A0D9SF12 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC163A0A0D9SF12 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC163A0A0D9SF12 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
CCDC163A0A0D9SF12 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.3■■□□□ 1
CCDC163A0A0D9SF12 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC163A0A0D9SF12 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.3■■□□□ 1
CCDC163A0A0D9SF12 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.3■■□□□ 1
CCDC163A0A0D9SF12 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms