Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC27.55■■■□□ 2
LOC102724428A0A0B4J2F2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC27.55■■■□□ 2
LOC102724428A0A0B4J2F2 AC092068.2-201ENST00000590491 1708 ntBASIC27.55■■■□□ 2
LOC102724428A0A0B4J2F2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC27.55■■■□□ 2
LOC102724428A0A0B4J2F2 LINC00526-201ENST00000581067 1875 ntBASIC27.55■■■□□ 2
LOC102724428A0A0B4J2F2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
LOC102724428A0A0B4J2F2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
LOC102724428A0A0B4J2F2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
LOC102724428A0A0B4J2F2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.54■■■□□ 2
LOC102724428A0A0B4J2F2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC27.54■■■□□ 2
LOC102724428A0A0B4J2F2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
LOC102724428A0A0B4J2F2 AC098590.1-201ENST00000468126 897 ntBASIC27.54■■■□□ 2
LOC102724428A0A0B4J2F2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
LOC102724428A0A0B4J2F2 RARRES2P4-201ENST00000514074 484 ntBASIC27.54■■■□□ 2
LOC102724428A0A0B4J2F2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
LOC102724428A0A0B4J2F2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC27.54■■■□□ 2
LOC102724428A0A0B4J2F2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC27.54■■■□□ 2
LOC102724428A0A0B4J2F2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC27.54■■■□□ 2
LOC102724428A0A0B4J2F2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC27.54■■■□□ 2
LOC102724428A0A0B4J2F2 AC008694.1-202ENST00000636953 945 ntBASIC27.54■■■□□ 2
LOC102724428A0A0B4J2F2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
LOC102724428A0A0B4J2F2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
LOC102724428A0A0B4J2F2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
LOC102724428A0A0B4J2F2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
LOC102724428A0A0B4J2F2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
LOC102724428A0A0B4J2F2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC27.53■■■□□ 2
LOC102724428A0A0B4J2F2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC27.53■■■□□ 2
LOC102724428A0A0B4J2F2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
LOC102724428A0A0B4J2F2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC27.53■■■□□ 2
LOC102724428A0A0B4J2F2 AC069236.1-201ENST00000604339 616 ntBASIC27.53■■■□□ 2
LOC102724428A0A0B4J2F2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
LOC102724428A0A0B4J2F2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
LOC102724428A0A0B4J2F2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 AP006587.3-201ENST00000525742 1516 ntBASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 AL034346.1-201ENST00000568244 1277 ntBASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 MYC-209ENST00000641252 345 ntBASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC27.52■■■□□ 2
LOC102724428A0A0B4J2F2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC27.51■■■□□ 2
LOC102724428A0A0B4J2F2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■■□□ 2
LOC102724428A0A0B4J2F2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
LOC102724428A0A0B4J2F2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
LOC102724428A0A0B4J2F2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
LOC102724428A0A0B4J2F2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
LOC102724428A0A0B4J2F2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
LOC102724428A0A0B4J2F2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
LOC102724428A0A0B4J2F2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
LOC102724428A0A0B4J2F2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC27.51■■□□□ 1.99
LOC102724428A0A0B4J2F2 BX276092.2-201ENST00000417668 665 ntBASIC27.51■■□□□ 1.99
LOC102724428A0A0B4J2F2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC27.51■■□□□ 1.99
LOC102724428A0A0B4J2F2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC27.51■■□□□ 1.99
LOC102724428A0A0B4J2F2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
LOC102724428A0A0B4J2F2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
LOC102724428A0A0B4J2F2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
LOC102724428A0A0B4J2F2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
LOC102724428A0A0B4J2F2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
LOC102724428A0A0B4J2F2 DUSP5P2-201ENST00000426873 1033 ntBASIC27.5■■□□□ 1.99
LOC102724428A0A0B4J2F2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC27.5■■□□□ 1.99
LOC102724428A0A0B4J2F2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC27.5■■□□□ 1.99
LOC102724428A0A0B4J2F2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC27.5■■□□□ 1.99
LOC102724428A0A0B4J2F2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC27.5■■□□□ 1.99
LOC102724428A0A0B4J2F2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
LOC102724428A0A0B4J2F2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
LOC102724428A0A0B4J2F2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
LOC102724428A0A0B4J2F2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
LOC102724428A0A0B4J2F2 ADM-205ENST00000528544 586 ntTSL 2 BASIC27.49■■□□□ 1.99
LOC102724428A0A0B4J2F2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC27.49■■□□□ 1.99
LOC102724428A0A0B4J2F2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC27.49■■□□□ 1.99
LOC102724428A0A0B4J2F2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
LOC102724428A0A0B4J2F2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
LOC102724428A0A0B4J2F2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
LOC102724428A0A0B4J2F2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
LOC102724428A0A0B4J2F2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
LOC102724428A0A0B4J2F2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC27.48■■□□□ 1.99
LOC102724428A0A0B4J2F2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC27.48■■□□□ 1.99
LOC102724428A0A0B4J2F2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC27.48■■□□□ 1.99
LOC102724428A0A0B4J2F2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC27.48■■□□□ 1.99
LOC102724428A0A0B4J2F2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC27.48■■□□□ 1.99
LOC102724428A0A0B4J2F2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC27.48■■□□□ 1.99
LOC102724428A0A0B4J2F2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.48■■□□□ 1.99
LOC102724428A0A0B4J2F2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
LOC102724428A0A0B4J2F2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
LOC102724428A0A0B4J2F2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
LOC102724428A0A0B4J2F2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
LOC102724428A0A0B4J2F2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.47■■□□□ 1.99
LOC102724428A0A0B4J2F2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
LOC102724428A0A0B4J2F2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC27.47■■□□□ 1.99
LOC102724428A0A0B4J2F2 ESRRAP1-201ENST00000400596 1257 ntBASIC27.47■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms