Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGC4Q9Y5F7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PCDHGC4Q9Y5F7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGC4Q9Y5F7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.7■■□□□ 1.06
PCDHGC4Q9Y5F7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHGC4Q9Y5F7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.7■■□□□ 1.06
PCDHGC4Q9Y5F7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGC4Q9Y5F7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGC4Q9Y5F7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDHGC4Q9Y5F7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHGC4Q9Y5F7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHGC4Q9Y5F7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGC4Q9Y5F7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC4Q9Y5F7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC4Q9Y5F7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHGC4Q9Y5F7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PCDHGC4Q9Y5F7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC4Q9Y5F7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC4Q9Y5F7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC4Q9Y5F7 AC097381.1-201ENST00000429019 1296 ntBASIC21.69■■□□□ 1.06
PCDHGC4Q9Y5F7 AC123595.1-201ENST00000440769 1046 ntBASIC21.69■■□□□ 1.06
PCDHGC4Q9Y5F7 MIR6821-201ENST00000617625 74 ntBASIC21.69■■□□□ 1.06
PCDHGC4Q9Y5F7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC4Q9Y5F7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC4Q9Y5F7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 AL034346.1-201ENST00000568244 1277 ntBASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 AC087623.3-201ENST00000607047 1098 ntBASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 LINC02228-203ENST00000641970 1355 ntBASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCDHGC4Q9Y5F7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGC4Q9Y5F7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGC4Q9Y5F7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGC4Q9Y5F7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGC4Q9Y5F7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHGC4Q9Y5F7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PCDHGC4Q9Y5F7 AC009237.3-201ENST00000393279 1427 ntBASIC21.67■■□□□ 1.06
PCDHGC4Q9Y5F7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGC4Q9Y5F7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PCDHGC4Q9Y5F7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PCDHGC4Q9Y5F7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PCDHGC4Q9Y5F7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGC4Q9Y5F7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGC4Q9Y5F7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGC4Q9Y5F7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGC4Q9Y5F7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGC4Q9Y5F7 AC005224.4-201ENST00000583262 1652 ntBASIC21.66■■□□□ 1.06
PCDHGC4Q9Y5F7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.66■■□□□ 1.06
PCDHGC4Q9Y5F7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGC4Q9Y5F7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGC4Q9Y5F7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGC4Q9Y5F7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGC4Q9Y5F7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGC4Q9Y5F7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHGC4Q9Y5F7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.66■■□□□ 1.06
PCDHGC4Q9Y5F7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGC4Q9Y5F7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PCDHGC4Q9Y5F7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGC4Q9Y5F7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PCDHGC4Q9Y5F7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC4Q9Y5F7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC4Q9Y5F7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC4Q9Y5F7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHGC4Q9Y5F7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC4Q9Y5F7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC4Q9Y5F7 CCDC92B-201ENST00000575506 885 ntBASIC21.65■■□□□ 1.06
PCDHGC4Q9Y5F7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.65■■□□□ 1.06
PCDHGC4Q9Y5F7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC4Q9Y5F7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC4Q9Y5F7 AC026471.6-201ENST00000622954 1905 ntBASIC21.65■■□□□ 1.06
PCDHGC4Q9Y5F7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.64■■□□□ 1.06
PCDHGC4Q9Y5F7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGC4Q9Y5F7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGC4Q9Y5F7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGC4Q9Y5F7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGC4Q9Y5F7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHGC4Q9Y5F7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PCDHGC4Q9Y5F7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGC4Q9Y5F7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGC4Q9Y5F7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGC4Q9Y5F7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
PCDHGC4Q9Y5F7 FAM99A-202ENST00000538190 1989 ntBASIC21.64■■□□□ 1.05
PCDHGC4Q9Y5F7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms