Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
PCDHGC3Q9UN70 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.74■■□□□ 1.23
PCDHGC3Q9UN70 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDHGC3Q9UN70 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.74■■□□□ 1.23
PCDHGC3Q9UN70 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.74■■□□□ 1.23
PCDHGC3Q9UN70 AC012414.1-201ENST00000556676 535 ntBASIC22.74■■□□□ 1.23
PCDHGC3Q9UN70 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.74■■□□□ 1.23
PCDHGC3Q9UN70 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGC3Q9UN70 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGC3Q9UN70 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDHGC3Q9UN70 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.73■■□□□ 1.23
PCDHGC3Q9UN70 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDHGC3Q9UN70 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGC3Q9UN70 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.73■■□□□ 1.23
PCDHGC3Q9UN70 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGC3Q9UN70 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGC3Q9UN70 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGC3Q9UN70 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.73■■□□□ 1.23
PCDHGC3Q9UN70 AC105265.2-201ENST00000467189 838 ntBASIC22.73■■□□□ 1.23
PCDHGC3Q9UN70 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.73■■□□□ 1.23
PCDHGC3Q9UN70 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDHGC3Q9UN70 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDHGC3Q9UN70 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGC3Q9UN70 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGC3Q9UN70 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGC3Q9UN70 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGC3Q9UN70 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
PCDHGC3Q9UN70 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.72■■□□□ 1.23
PCDHGC3Q9UN70 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.72■■□□□ 1.23
PCDHGC3Q9UN70 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.72■■□□□ 1.23
PCDHGC3Q9UN70 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
PCDHGC3Q9UN70 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHGC3Q9UN70 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.72■■□□□ 1.23
PCDHGC3Q9UN70 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGC3Q9UN70 AP006587.3-201ENST00000525742 1516 ntBASIC22.72■■□□□ 1.23
PCDHGC3Q9UN70 FBXW4P1-201ENST00000426721 2239 ntBASIC22.72■■□□□ 1.23
PCDHGC3Q9UN70 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGC3Q9UN70 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDHGC3Q9UN70 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDHGC3Q9UN70 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGC3Q9UN70 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDHGC3Q9UN70 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGC3Q9UN70 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDHGC3Q9UN70 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGC3Q9UN70 AC009237.3-201ENST00000393279 1427 ntBASIC22.71■■□□□ 1.23
PCDHGC3Q9UN70 BX005040.4-201ENST00000637145 1518 ntBASIC22.71■■□□□ 1.23
PCDHGC3Q9UN70 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDHGC3Q9UN70 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGC3Q9UN70 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDHGC3Q9UN70 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGC3Q9UN70 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGC3Q9UN70 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGC3Q9UN70 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGC3Q9UN70 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
PCDHGC3Q9UN70 AL354811.1-201ENST00000610286 706 ntBASIC22.7■■□□□ 1.22
PCDHGC3Q9UN70 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGC3Q9UN70 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
PCDHGC3Q9UN70 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGC3Q9UN70 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGC3Q9UN70 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
PCDHGC3Q9UN70 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGC3Q9UN70 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGC3Q9UN70 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.7■■□□□ 1.22
PCDHGC3Q9UN70 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGC3Q9UN70 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGC3Q9UN70 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHGC3Q9UN70 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGC3Q9UN70 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHGC3Q9UN70 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHGC3Q9UN70 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHGC3Q9UN70 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGC3Q9UN70 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHGC3Q9UN70 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PCDHGC3Q9UN70 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.69■■□□□ 1.22
PCDHGC3Q9UN70 IRS3P-201ENST00000223076 1006 ntBASIC22.69■■□□□ 1.22
PCDHGC3Q9UN70 AL358852.1-201ENST00000623174 1268 ntBASIC22.69■■□□□ 1.22
PCDHGC3Q9UN70 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
PCDHGC3Q9UN70 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGC3Q9UN70 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGC3Q9UN70 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGC3Q9UN70 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
PCDHGC3Q9UN70 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGC3Q9UN70 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.68■■□□□ 1.22
PCDHGC3Q9UN70 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.68■■□□□ 1.22
PCDHGC3Q9UN70 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGC3Q9UN70 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGC3Q9UN70 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHGC3Q9UN70 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGC3Q9UN70 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGC3Q9UN70 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDHGC3Q9UN70 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGC3Q9UN70 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHGC3Q9UN70 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PCDHGC3Q9UN70 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGC3Q9UN70 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGC3Q9UN70 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGC3Q9UN70 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGC3Q9UN70 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGC3Q9UN70 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGC3Q9UN70 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms