Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 LINC01960-201ENST00000563759 1884 ntBASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCNB1IP1Q9NPC3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CCNB1IP1Q9NPC3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
CCNB1IP1Q9NPC3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.77■□□□□ 0.75
CCNB1IP1Q9NPC3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNB1IP1Q9NPC3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 AL157384.1-201ENST00000445995 2473 ntBASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCNB1IP1Q9NPC3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.74■□□□□ 0.75
CCNB1IP1Q9NPC3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNB1IP1Q9NPC3 FEM1AP4-201ENST00000443167 1987 ntBASIC19.74■□□□□ 0.75
CCNB1IP1Q9NPC3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.74■□□□□ 0.75
CCNB1IP1Q9NPC3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNB1IP1Q9NPC3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCNB1IP1Q9NPC3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCNB1IP1Q9NPC3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.74■□□□□ 0.75
CCNB1IP1Q9NPC3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCNB1IP1Q9NPC3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCNB1IP1Q9NPC3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.73■□□□□ 0.75
CCNB1IP1Q9NPC3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNB1IP1Q9NPC3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.73■□□□□ 0.75
CCNB1IP1Q9NPC3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CCNB1IP1Q9NPC3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNB1IP1Q9NPC3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNB1IP1Q9NPC3 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.73■□□□□ 0.75
CCNB1IP1Q9NPC3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.73■□□□□ 0.75
CCNB1IP1Q9NPC3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNB1IP1Q9NPC3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNB1IP1Q9NPC3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCNB1IP1Q9NPC3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCNB1IP1Q9NPC3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCNB1IP1Q9NPC3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCNB1IP1Q9NPC3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCNB1IP1Q9NPC3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNB1IP1Q9NPC3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNB1IP1Q9NPC3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNB1IP1Q9NPC3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.72■□□□□ 0.75
CCNB1IP1Q9NPC3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNB1IP1Q9NPC3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNB1IP1Q9NPC3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCNB1IP1Q9NPC3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.72■□□□□ 0.75
CCNB1IP1Q9NPC3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCNB1IP1Q9NPC3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CCNB1IP1Q9NPC3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.71■□□□□ 0.75
CCNB1IP1Q9NPC3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CCNB1IP1Q9NPC3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCNB1IP1Q9NPC3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.71■□□□□ 0.75
CCNB1IP1Q9NPC3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNB1IP1Q9NPC3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNB1IP1Q9NPC3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.71■□□□□ 0.75
CCNB1IP1Q9NPC3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.71■□□□□ 0.75
CCNB1IP1Q9NPC3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.71■□□□□ 0.75
CCNB1IP1Q9NPC3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNB1IP1Q9NPC3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCNB1IP1Q9NPC3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNB1IP1Q9NPC3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCNB1IP1Q9NPC3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCNB1IP1Q9NPC3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNB1IP1Q9NPC3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.7■□□□□ 0.74
CCNB1IP1Q9NPC3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNB1IP1Q9NPC3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNB1IP1Q9NPC3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCNB1IP1Q9NPC3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNB1IP1Q9NPC3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms