Protein–RNA interactions for Protein: Q9HC29

NOD2, Nucleotide-binding oligomerization domain-containing protein 2, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD2Q9HC29 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.17■■□□□ 1.14
NOD2Q9HC29 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
NOD2Q9HC29 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.17■■□□□ 1.14
NOD2Q9HC29 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
NOD2Q9HC29 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NOD2Q9HC29 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NOD2Q9HC29 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
NOD2Q9HC29 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NOD2Q9HC29 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
NOD2Q9HC29 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NOD2Q9HC29 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NOD2Q9HC29 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NOD2Q9HC29 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.16■■□□□ 1.14
NOD2Q9HC29 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
NOD2Q9HC29 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
NOD2Q9HC29 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
NOD2Q9HC29 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.16■■□□□ 1.14
NOD2Q9HC29 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.16■■□□□ 1.14
NOD2Q9HC29 AP005435.1-201ENST00000529293 1178 ntBASIC22.16■■□□□ 1.14
NOD2Q9HC29 AC126544.1-201ENST00000580842 1059 ntBASIC22.16■■□□□ 1.14
NOD2Q9HC29 CA15P2-201ENST00000611168 834 ntBASIC22.16■■□□□ 1.14
NOD2Q9HC29 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.16■■□□□ 1.14
NOD2Q9HC29 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NOD2Q9HC29 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NOD2Q9HC29 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
NOD2Q9HC29 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.16■■□□□ 1.14
NOD2Q9HC29 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
NOD2Q9HC29 AC242852.2-201ENST00000615738 1807 ntBASIC22.15■■□□□ 1.14
NOD2Q9HC29 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.15■■□□□ 1.14
NOD2Q9HC29 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
NOD2Q9HC29 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
NOD2Q9HC29 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
NOD2Q9HC29 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.15■■□□□ 1.14
NOD2Q9HC29 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.15■■□□□ 1.14
NOD2Q9HC29 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.15■■□□□ 1.14
NOD2Q9HC29 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.15■■□□□ 1.14
NOD2Q9HC29 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NOD2Q9HC29 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NOD2Q9HC29 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NOD2Q9HC29 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.15■■□□□ 1.14
NOD2Q9HC29 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NOD2Q9HC29 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NOD2Q9HC29 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NOD2Q9HC29 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.15■■□□□ 1.14
NOD2Q9HC29 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
NOD2Q9HC29 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NOD2Q9HC29 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.14■■□□□ 1.13
NOD2Q9HC29 AC068587.7-201ENST00000641602 218 ntBASIC22.14■■□□□ 1.13
NOD2Q9HC29 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NOD2Q9HC29 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.14■■□□□ 1.13
NOD2Q9HC29 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
NOD2Q9HC29 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NOD2Q9HC29 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NOD2Q9HC29 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NOD2Q9HC29 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.13■■□□□ 1.13
NOD2Q9HC29 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NOD2Q9HC29 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NOD2Q9HC29 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NOD2Q9HC29 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NOD2Q9HC29 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.13■■□□□ 1.13
NOD2Q9HC29 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.13■■□□□ 1.13
NOD2Q9HC29 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NOD2Q9HC29 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NOD2Q9HC29 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
NOD2Q9HC29 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
NOD2Q9HC29 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NOD2Q9HC29 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NOD2Q9HC29 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
NOD2Q9HC29 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NOD2Q9HC29 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NOD2Q9HC29 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
NOD2Q9HC29 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.12■■□□□ 1.13
NOD2Q9HC29 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.12■■□□□ 1.13
NOD2Q9HC29 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.12■■□□□ 1.13
NOD2Q9HC29 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NOD2Q9HC29 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NOD2Q9HC29 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NOD2Q9HC29 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NOD2Q9HC29 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
NOD2Q9HC29 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NOD2Q9HC29 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NOD2Q9HC29 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
NOD2Q9HC29 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
NOD2Q9HC29 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NOD2Q9HC29 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NOD2Q9HC29 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NOD2Q9HC29 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.11■■□□□ 1.13
NOD2Q9HC29 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.11■■□□□ 1.13
NOD2Q9HC29 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
NOD2Q9HC29 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NOD2Q9HC29 ESRRAP2-201ENST00000418437 1549 ntBASIC22.11■■□□□ 1.13
NOD2Q9HC29 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
NOD2Q9HC29 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NOD2Q9HC29 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
NOD2Q9HC29 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NOD2Q9HC29 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NOD2Q9HC29 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NOD2Q9HC29 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
NOD2Q9HC29 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
NOD2Q9HC29 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms