Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 Z98882.1-201ENST00000622160 2253 ntBASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.14■□□□□ 0.98
POPDC3Q9HBV1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
POPDC3Q9HBV1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
POPDC3Q9HBV1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.14■□□□□ 0.98
POPDC3Q9HBV1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.14■□□□□ 0.97
POPDC3Q9HBV1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.14■□□□□ 0.97
POPDC3Q9HBV1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
POPDC3Q9HBV1 MIR4767-201ENST00000582827 78 ntBASIC21.14■□□□□ 0.97
POPDC3Q9HBV1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
POPDC3Q9HBV1 AP004607.7-201ENST00000527152 1677 ntBASIC21.14■□□□□ 0.97
POPDC3Q9HBV1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
POPDC3Q9HBV1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POPDC3Q9HBV1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.14■□□□□ 0.97
POPDC3Q9HBV1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 AC133561.4-201ENST00000566112 224 ntBASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
POPDC3Q9HBV1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POPDC3Q9HBV1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.12■□□□□ 0.97
POPDC3Q9HBV1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POPDC3Q9HBV1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.12■□□□□ 0.97
POPDC3Q9HBV1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.12■□□□□ 0.97
POPDC3Q9HBV1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.12■□□□□ 0.97
POPDC3Q9HBV1 AC233992.3-201ENST00000607491 485 ntBASIC21.12■□□□□ 0.97
POPDC3Q9HBV1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POPDC3Q9HBV1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.12■□□□□ 0.97
POPDC3Q9HBV1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.12■□□□□ 0.97
POPDC3Q9HBV1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.11■□□□□ 0.97
POPDC3Q9HBV1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
POPDC3Q9HBV1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
POPDC3Q9HBV1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
POPDC3Q9HBV1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
POPDC3Q9HBV1 AL136162.1-201ENST00000607711 1078 ntBASIC21.11■□□□□ 0.97
POPDC3Q9HBV1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.11■□□□□ 0.97
POPDC3Q9HBV1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POPDC3Q9HBV1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POPDC3Q9HBV1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POPDC3Q9HBV1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POPDC3Q9HBV1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.1■□□□□ 0.97
POPDC3Q9HBV1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
POPDC3Q9HBV1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.1■□□□□ 0.97
POPDC3Q9HBV1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POPDC3Q9HBV1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POPDC3Q9HBV1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POPDC3Q9HBV1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POPDC3Q9HBV1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POPDC3Q9HBV1 AC131212.1-201ENST00000613771 668 ntBASIC21.1■□□□□ 0.97
POPDC3Q9HBV1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
POPDC3Q9HBV1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POPDC3Q9HBV1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
POPDC3Q9HBV1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
POPDC3Q9HBV1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 AC135279.3-201ENST00000610945 1311 ntBASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 AC024257.2-201ENST00000549699 147 ntBASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
POPDC3Q9HBV1 AL137060.1-201ENST00000618151 2648 ntBASIC21.08■□□□□ 0.97
POPDC3Q9HBV1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.08■□□□□ 0.97
POPDC3Q9HBV1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.08■□□□□ 0.97
POPDC3Q9HBV1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
POPDC3Q9HBV1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
POPDC3Q9HBV1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.08■□□□□ 0.97
POPDC3Q9HBV1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.08■□□□□ 0.97
POPDC3Q9HBV1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.08■□□□□ 0.97
POPDC3Q9HBV1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
POPDC3Q9HBV1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
POPDC3Q9HBV1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.08■□□□□ 0.97
POPDC3Q9HBV1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms