Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 AC027612.3-201ENST00000413684 1047 ntBASIC17.89■□□□□ 0.45
GAFA1Q96PS6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 AC009237.3-201ENST00000393279 1427 ntBASIC17.89■□□□□ 0.45
GAFA1Q96PS6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GAFA1Q96PS6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GAFA1Q96PS6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GAFA1Q96PS6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
GAFA1Q96PS6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.87■□□□□ 0.45
GAFA1Q96PS6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GAFA1Q96PS6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
GAFA1Q96PS6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.87■□□□□ 0.45
GAFA1Q96PS6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.87■□□□□ 0.45
GAFA1Q96PS6 TPRG1LP1-201ENST00000598702 760 ntBASIC17.87■□□□□ 0.45
GAFA1Q96PS6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GAFA1Q96PS6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
GAFA1Q96PS6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GAFA1Q96PS6 AP006587.3-201ENST00000525742 1516 ntBASIC17.87■□□□□ 0.45
GAFA1Q96PS6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
GAFA1Q96PS6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GAFA1Q96PS6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
GAFA1Q96PS6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
GAFA1Q96PS6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GAFA1Q96PS6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GAFA1Q96PS6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GAFA1Q96PS6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.86■□□□□ 0.45
GAFA1Q96PS6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.86■□□□□ 0.45
GAFA1Q96PS6 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.86■□□□□ 0.45
GAFA1Q96PS6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.86■□□□□ 0.45
GAFA1Q96PS6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GAFA1Q96PS6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.86■□□□□ 0.45
GAFA1Q96PS6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.86■□□□□ 0.45
GAFA1Q96PS6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GAFA1Q96PS6 AC005224.4-201ENST00000583262 1652 ntBASIC17.86■□□□□ 0.45
GAFA1Q96PS6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GAFA1Q96PS6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GAFA1Q96PS6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GAFA1Q96PS6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GAFA1Q96PS6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GAFA1Q96PS6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
GAFA1Q96PS6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
GAFA1Q96PS6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GAFA1Q96PS6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
GAFA1Q96PS6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GAFA1Q96PS6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GAFA1Q96PS6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.85■□□□□ 0.45
GAFA1Q96PS6 AC026471.6-201ENST00000622954 1905 ntBASIC17.85■□□□□ 0.45
GAFA1Q96PS6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GAFA1Q96PS6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GAFA1Q96PS6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GAFA1Q96PS6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GAFA1Q96PS6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GAFA1Q96PS6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.84■□□□□ 0.45
GAFA1Q96PS6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GAFA1Q96PS6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GAFA1Q96PS6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
GAFA1Q96PS6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
GAFA1Q96PS6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.84■□□□□ 0.45
GAFA1Q96PS6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GAFA1Q96PS6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms