Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.17■□□□□ 0.18
AP1S3Q96PC3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 AC092053.2-201ENST00000640557 1818 ntBASIC16.17■□□□□ 0.18
AP1S3Q96PC3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S3Q96PC3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.15■□□□□ 0.18
AP1S3Q96PC3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S3Q96PC3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S3Q96PC3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S3Q96PC3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.15■□□□□ 0.18
AP1S3Q96PC3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S3Q96PC3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.15■□□□□ 0.18
AP1S3Q96PC3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
AP1S3Q96PC3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S3Q96PC3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S3Q96PC3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S3Q96PC3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.15■□□□□ 0.18
AP1S3Q96PC3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
AP1S3Q96PC3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.15■□□□□ 0.18
AP1S3Q96PC3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S3Q96PC3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
AP1S3Q96PC3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 AL353803.4-201ENST00000565882 1934 ntBASIC16.14■□□□□ 0.17
AP1S3Q96PC3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 C11orf96-202ENST00000528572 1834 ntBASIC16.14■□□□□ 0.17
AP1S3Q96PC3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S3Q96PC3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 AC139795.1-202ENST00000500444 432 ntBASIC16.13■□□□□ 0.17
AP1S3Q96PC3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 AC019171.1-201ENST00000601251 1056 ntBASIC16.13■□□□□ 0.17
AP1S3Q96PC3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms