Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.28■□□□□ 0.36
RITA1Q96K30 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RITA1Q96K30 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RITA1Q96K30 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RITA1Q96K30 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RITA1Q96K30 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RITA1Q96K30 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RITA1Q96K30 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RITA1Q96K30 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.27■□□□□ 0.36
RITA1Q96K30 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RITA1Q96K30 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.27■□□□□ 0.36
RITA1Q96K30 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.27■□□□□ 0.36
RITA1Q96K30 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.27■□□□□ 0.36
RITA1Q96K30 AC142381.2-201ENST00000566120 298 ntBASIC17.27■□□□□ 0.36
RITA1Q96K30 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RITA1Q96K30 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RITA1Q96K30 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.27■□□□□ 0.35
RITA1Q96K30 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RITA1Q96K30 AP004607.7-201ENST00000527152 1677 ntBASIC17.26■□□□□ 0.35
RITA1Q96K30 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RITA1Q96K30 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.26■□□□□ 0.35
RITA1Q96K30 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RITA1Q96K30 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RITA1Q96K30 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RITA1Q96K30 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.26■□□□□ 0.35
RITA1Q96K30 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RITA1Q96K30 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.26■□□□□ 0.35
RITA1Q96K30 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RITA1Q96K30 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.26■□□□□ 0.35
RITA1Q96K30 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.26■□□□□ 0.35
RITA1Q96K30 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RITA1Q96K30 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.26■□□□□ 0.35
RITA1Q96K30 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RITA1Q96K30 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RITA1Q96K30 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RITA1Q96K30 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.26■□□□□ 0.35
RITA1Q96K30 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RITA1Q96K30 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RITA1Q96K30 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.26■□□□□ 0.35
RITA1Q96K30 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RITA1Q96K30 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.26■□□□□ 0.35
RITA1Q96K30 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.25■□□□□ 0.35
RITA1Q96K30 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.25■□□□□ 0.35
RITA1Q96K30 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.25■□□□□ 0.35
RITA1Q96K30 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RITA1Q96K30 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.25■□□□□ 0.35
RITA1Q96K30 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.25■□□□□ 0.35
RITA1Q96K30 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.25■□□□□ 0.35
RITA1Q96K30 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RITA1Q96K30 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RITA1Q96K30 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.25■□□□□ 0.35
RITA1Q96K30 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RITA1Q96K30 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RITA1Q96K30 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RITA1Q96K30 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.24■□□□□ 0.35
RITA1Q96K30 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RITA1Q96K30 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RITA1Q96K30 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.24■□□□□ 0.35
RITA1Q96K30 AC007375.3-201ENST00000600936 2314 ntBASIC17.24■□□□□ 0.35
RITA1Q96K30 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RITA1Q96K30 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RITA1Q96K30 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RITA1Q96K30 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RITA1Q96K30 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.24■□□□□ 0.35
RITA1Q96K30 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.24■□□□□ 0.35
RITA1Q96K30 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RITA1Q96K30 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.24■□□□□ 0.35
RITA1Q96K30 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.24■□□□□ 0.35
RITA1Q96K30 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.24■□□□□ 0.35
RITA1Q96K30 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RITA1Q96K30 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RITA1Q96K30 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RITA1Q96K30 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RITA1Q96K30 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RITA1Q96K30 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RITA1Q96K30 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RITA1Q96K30 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RITA1Q96K30 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
RITA1Q96K30 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.23■□□□□ 0.35
RITA1Q96K30 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RITA1Q96K30 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.23■□□□□ 0.35
RITA1Q96K30 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.23■□□□□ 0.35
RITA1Q96K30 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.23■□□□□ 0.35
RITA1Q96K30 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RITA1Q96K30 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.23■□□□□ 0.35
RITA1Q96K30 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RITA1Q96K30 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RITA1Q96K30 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RITA1Q96K30 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.22■□□□□ 0.35
RITA1Q96K30 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.22■□□□□ 0.35
RITA1Q96K30 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RITA1Q96K30 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.22■□□□□ 0.35
RITA1Q96K30 AC105233.4-201ENST00000642045 216 ntBASIC17.22■□□□□ 0.35
RITA1Q96K30 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RITA1Q96K30 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.22■□□□□ 0.35
RITA1Q96K30 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RITA1Q96K30 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RITA1Q96K30 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RITA1Q96K30 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RITA1Q96K30 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms