Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM5Q96HC4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM5Q96HC4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM5Q96HC4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM5Q96HC4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.04■□□□□ 0.96
PDLIM5Q96HC4 SMUG1P1-201ENST00000590640 811 ntBASIC21.04■□□□□ 0.96
PDLIM5Q96HC4 AC110285.6-201ENST00000617652 491 ntBASIC21.04■□□□□ 0.96
PDLIM5Q96HC4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM5Q96HC4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM5Q96HC4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM5Q96HC4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM5Q96HC4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM5Q96HC4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM5Q96HC4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM5Q96HC4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM5Q96HC4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM5Q96HC4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM5Q96HC4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.03■□□□□ 0.96
PDLIM5Q96HC4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM5Q96HC4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.03■□□□□ 0.96
PDLIM5Q96HC4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.03■□□□□ 0.96
PDLIM5Q96HC4 AC008764.7-201ENST00000593779 1081 ntBASIC21.03■□□□□ 0.96
PDLIM5Q96HC4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.03■□□□□ 0.96
PDLIM5Q96HC4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.03■□□□□ 0.96
PDLIM5Q96HC4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM5Q96HC4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.03■□□□□ 0.96
PDLIM5Q96HC4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.03■□□□□ 0.96
PDLIM5Q96HC4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 AC027682.1-201ENST00000562846 899 ntBASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 AC104564.3-201ENST00000582367 638 ntBASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 AL355001.2-201ENST00000620617 1191 ntBASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDLIM5Q96HC4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.02■□□□□ 0.95
PDLIM5Q96HC4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDLIM5Q96HC4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.01■□□□□ 0.95
PDLIM5Q96HC4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDLIM5Q96HC4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDLIM5Q96HC4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PDLIM5Q96HC4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDLIM5Q96HC4 AC099791.1-201ENST00000416440 715 ntBASIC21.01■□□□□ 0.95
PDLIM5Q96HC4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDLIM5Q96HC4 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.01■□□□□ 0.95
PDLIM5Q96HC4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PDLIM5Q96HC4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDLIM5Q96HC4 AC007375.3-201ENST00000600936 2314 ntBASIC21.01■□□□□ 0.95
PDLIM5Q96HC4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PDLIM5Q96HC4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.01■□□□□ 0.95
PDLIM5Q96HC4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDLIM5Q96HC4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDLIM5Q96HC4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21■□□□□ 0.95
PDLIM5Q96HC4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PDLIM5Q96HC4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDLIM5Q96HC4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDLIM5Q96HC4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PDLIM5Q96HC4 AP001330.3-201ENST00000520123 633 ntBASIC21■□□□□ 0.95
PDLIM5Q96HC4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDLIM5Q96HC4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21■□□□□ 0.95
PDLIM5Q96HC4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.99■□□□□ 0.95
PDLIM5Q96HC4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.99■□□□□ 0.95
PDLIM5Q96HC4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PDLIM5Q96HC4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM5Q96HC4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM5Q96HC4 AC026310.3-201ENST00000625186 2373 ntBASIC20.99■□□□□ 0.95
PDLIM5Q96HC4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM5Q96HC4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM5Q96HC4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.99■□□□□ 0.95
PDLIM5Q96HC4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM5Q96HC4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM5Q96HC4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PDLIM5Q96HC4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM5Q96HC4 RASA4CP-201ENST00000424092 1398 ntBASIC20.98■□□□□ 0.95
PDLIM5Q96HC4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDLIM5Q96HC4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.98■□□□□ 0.95
PDLIM5Q96HC4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.98■□□□□ 0.95
PDLIM5Q96HC4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDLIM5Q96HC4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDLIM5Q96HC4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.98■□□□□ 0.95
PDLIM5Q96HC4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDLIM5Q96HC4 MIR939-201ENST00000401314 82 ntBASIC20.98■□□□□ 0.95
PDLIM5Q96HC4 AL031432.3-201ENST00000607698 485 ntBASIC20.98■□□□□ 0.95
PDLIM5Q96HC4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.98■□□□□ 0.95
PDLIM5Q96HC4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PDLIM5Q96HC4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDLIM5Q96HC4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDLIM5Q96HC4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms