Protein–RNA interactions for Protein: Q8WVM8

SCFD1, Sec1 family domain-containing protein 1, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1Q8WVM8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.68■■□□□ 1.38
SCFD1Q8WVM8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SCFD1Q8WVM8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
SCFD1Q8WVM8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCFD1Q8WVM8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCFD1Q8WVM8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SCFD1Q8WVM8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SCFD1Q8WVM8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.67■■□□□ 1.38
SCFD1Q8WVM8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SCFD1Q8WVM8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCFD1Q8WVM8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.67■■□□□ 1.38
SCFD1Q8WVM8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCFD1Q8WVM8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SCFD1Q8WVM8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.67■■□□□ 1.38
SCFD1Q8WVM8 AC142381.2-201ENST00000566120 298 ntBASIC23.67■■□□□ 1.38
SCFD1Q8WVM8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SCFD1Q8WVM8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCFD1Q8WVM8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCFD1Q8WVM8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCFD1Q8WVM8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.66■■□□□ 1.38
SCFD1Q8WVM8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SCFD1Q8WVM8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.65■■□□□ 1.38
SCFD1Q8WVM8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.65■■□□□ 1.38
SCFD1Q8WVM8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
SCFD1Q8WVM8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCFD1Q8WVM8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCFD1Q8WVM8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.65■■□□□ 1.38
SCFD1Q8WVM8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCFD1Q8WVM8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCFD1Q8WVM8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SCFD1Q8WVM8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.64■■□□□ 1.38
SCFD1Q8WVM8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SCFD1Q8WVM8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCFD1Q8WVM8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SCFD1Q8WVM8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.64■■□□□ 1.37
SCFD1Q8WVM8 MIR572-201ENST00000384983 95 ntBASIC23.64■■□□□ 1.37
SCFD1Q8WVM8 AL034346.1-201ENST00000568244 1277 ntBASIC23.64■■□□□ 1.37
SCFD1Q8WVM8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SCFD1Q8WVM8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SCFD1Q8WVM8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SCFD1Q8WVM8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SCFD1Q8WVM8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SCFD1Q8WVM8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCFD1Q8WVM8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCFD1Q8WVM8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.63■■□□□ 1.37
SCFD1Q8WVM8 AC105233.4-201ENST00000642045 216 ntBASIC23.63■■□□□ 1.37
SCFD1Q8WVM8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCFD1Q8WVM8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
SCFD1Q8WVM8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.63■■□□□ 1.37
SCFD1Q8WVM8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCFD1Q8WVM8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.63■■□□□ 1.37
SCFD1Q8WVM8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCFD1Q8WVM8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SCFD1Q8WVM8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCFD1Q8WVM8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCFD1Q8WVM8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SCFD1Q8WVM8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCFD1Q8WVM8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCFD1Q8WVM8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCFD1Q8WVM8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.62■■□□□ 1.37
SCFD1Q8WVM8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.62■■□□□ 1.37
SCFD1Q8WVM8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.62■■□□□ 1.37
SCFD1Q8WVM8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCFD1Q8WVM8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
SCFD1Q8WVM8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.62■■□□□ 1.37
SCFD1Q8WVM8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.61■■□□□ 1.37
SCFD1Q8WVM8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.61■■□□□ 1.37
SCFD1Q8WVM8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCFD1Q8WVM8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.61■■□□□ 1.37
SCFD1Q8WVM8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCFD1Q8WVM8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.61■■□□□ 1.37
SCFD1Q8WVM8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.61■■□□□ 1.37
SCFD1Q8WVM8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.61■■□□□ 1.37
SCFD1Q8WVM8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCFD1Q8WVM8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.61■■□□□ 1.37
SCFD1Q8WVM8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SCFD1Q8WVM8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.61■■□□□ 1.37
SCFD1Q8WVM8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.61■■□□□ 1.37
SCFD1Q8WVM8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCFD1Q8WVM8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCFD1Q8WVM8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms