Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.17■□□□□ 0.5
Lsm1Q8VC85 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm1Q8VC85 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm1Q8VC85 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm1Q8VC85 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm1Q8VC85 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm1Q8VC85 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Lsm1Q8VC85 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm1Q8VC85 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm1Q8VC85 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Lsm1Q8VC85 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm1Q8VC85 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm1Q8VC85 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Lsm1Q8VC85 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm1Q8VC85 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm1Q8VC85 Smad6-203ENSMUST00000179458 273 ntBASIC18.16■□□□□ 0.5
Lsm1Q8VC85 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm1Q8VC85 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm1Q8VC85 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm1Q8VC85 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm1Q8VC85 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm1Q8VC85 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm1Q8VC85 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm1Q8VC85 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm1Q8VC85 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm1Q8VC85 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm1Q8VC85 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm1Q8VC85 Mir7075-201ENSMUST00000184187 82 ntBASIC18.15■□□□□ 0.5
Lsm1Q8VC85 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.15■□□□□ 0.5
Lsm1Q8VC85 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm1Q8VC85 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm1Q8VC85 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Lsm1Q8VC85 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm1Q8VC85 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm1Q8VC85 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm1Q8VC85 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm1Q8VC85 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.15■□□□□ 0.5
Lsm1Q8VC85 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Lsm1Q8VC85 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm1Q8VC85 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lsm1Q8VC85 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lsm1Q8VC85 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm1Q8VC85 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm1Q8VC85 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm1Q8VC85 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm1Q8VC85 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.14■□□□□ 0.49
Lsm1Q8VC85 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.14■□□□□ 0.49
Lsm1Q8VC85 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm1Q8VC85 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm1Q8VC85 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm1Q8VC85 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Lsm1Q8VC85 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm1Q8VC85 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm1Q8VC85 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm1Q8VC85 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm1Q8VC85 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Gm11421-201ENSMUST00000122124 294 ntBASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Gm43173-201ENSMUST00000202246 593 ntBASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm1Q8VC85 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm1Q8VC85 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm1Q8VC85 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm1Q8VC85 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm1Q8VC85 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm1Q8VC85 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Lsm1Q8VC85 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm1Q8VC85 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.12■□□□□ 0.49
Lsm1Q8VC85 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm1Q8VC85 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lsm1Q8VC85 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm1Q8VC85 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm1Q8VC85 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm1Q8VC85 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm1Q8VC85 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm1Q8VC85 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.12■□□□□ 0.49
Lsm1Q8VC85 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Lsm1Q8VC85 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm1Q8VC85 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm1Q8VC85 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm1Q8VC85 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Lsm1Q8VC85 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm1Q8VC85 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Lsm1Q8VC85 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm1Q8VC85 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm1Q8VC85 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm1Q8VC85 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
Lsm1Q8VC85 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms