Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01560Q8TB33 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01560Q8TB33 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC01560Q8TB33 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC01560Q8TB33 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC01560Q8TB33 SLC7A5P2-201ENST00000553010 536 ntBASIC18.65■□□□□ 0.58
LINC01560Q8TB33 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC01560Q8TB33 AL138781.1-201ENST00000566567 1274 ntBASIC18.65■□□□□ 0.58
LINC01560Q8TB33 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.65■□□□□ 0.58
LINC01560Q8TB33 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LINC01560Q8TB33 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01560Q8TB33 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01560Q8TB33 LINC00526-201ENST00000581067 1875 ntBASIC18.65■□□□□ 0.58
LINC01560Q8TB33 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01560Q8TB33 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LINC01560Q8TB33 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01560Q8TB33 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.64■□□□□ 0.57
LINC01560Q8TB33 SLC29A4P1-201ENST00000398760 971 ntBASIC18.64■□□□□ 0.57
LINC01560Q8TB33 GUSBP6-202ENST00000438529 1198 ntBASIC18.64■□□□□ 0.57
LINC01560Q8TB33 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
LINC01560Q8TB33 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.64■□□□□ 0.57
LINC01560Q8TB33 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.64■□□□□ 0.57
LINC01560Q8TB33 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.64■□□□□ 0.57
LINC01560Q8TB33 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LINC01560Q8TB33 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01560Q8TB33 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01560Q8TB33 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.64■□□□□ 0.57
LINC01560Q8TB33 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01560Q8TB33 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01560Q8TB33 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01560Q8TB33 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01560Q8TB33 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01560Q8TB33 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01560Q8TB33 AC010141.2-201ENST00000452426 721 ntBASIC18.63■□□□□ 0.57
LINC01560Q8TB33 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01560Q8TB33 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC01560Q8TB33 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.63■□□□□ 0.57
LINC01560Q8TB33 AC138907.5-202ENST00000569484 235 ntBASIC18.63■□□□□ 0.57
LINC01560Q8TB33 TMEM191A-211ENST00000637163 1067 ntBASIC18.63■□□□□ 0.57
LINC01560Q8TB33 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01560Q8TB33 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC01560Q8TB33 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01560Q8TB33 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01560Q8TB33 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 CNN2P6-201ENST00000439038 900 ntBASIC18.62■□□□□ 0.57
LINC01560Q8TB33 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 TSPY20P-201ENST00000450910 630 ntBASIC18.62■□□□□ 0.57
LINC01560Q8TB33 AC010536.3-201ENST00000620306 533 ntBASIC18.62■□□□□ 0.57
LINC01560Q8TB33 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01560Q8TB33 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01560Q8TB33 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01560Q8TB33 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01560Q8TB33 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.61■□□□□ 0.57
LINC01560Q8TB33 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LINC01560Q8TB33 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01560Q8TB33 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.61■□□□□ 0.57
LINC01560Q8TB33 AF201337.1-201ENST00000520239 748 ntBASIC18.61■□□□□ 0.57
LINC01560Q8TB33 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LINC01560Q8TB33 AC105036.2-201ENST00000569468 176 ntBASIC18.61■□□□□ 0.57
LINC01560Q8TB33 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.61■□□□□ 0.57
LINC01560Q8TB33 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
LINC01560Q8TB33 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01560Q8TB33 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
LINC01560Q8TB33 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01560Q8TB33 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01560Q8TB33 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01560Q8TB33 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
LINC01560Q8TB33 KRT18P20-201ENST00000548986 1279 ntBASIC18.6■□□□□ 0.57
LINC01560Q8TB33 KRT18P6-201ENST00000555540 1265 ntBASIC18.6■□□□□ 0.57
LINC01560Q8TB33 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01560Q8TB33 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01560Q8TB33 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.6■□□□□ 0.57
LINC01560Q8TB33 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LINC01560Q8TB33 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01560Q8TB33 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01560Q8TB33 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.6■□□□□ 0.57
LINC01560Q8TB33 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01560Q8TB33 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01560Q8TB33 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01560Q8TB33 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LINC01560Q8TB33 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
LINC01560Q8TB33 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.59■□□□□ 0.57
LINC01560Q8TB33 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC01560Q8TB33 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC01560Q8TB33 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms