Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 AC142381.3-201ENST00000568208 1670 ntBASIC6.57□□□□□ -1.36
SYNE1Q8NF91 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 ASL-203ENST00000380839 1765 ntTSL 5 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 METTL15-202ENST00000403099 795 ntTSL 5 BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE1Q8NF91 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 NCF1B-203ENST00000435988 1254 ntBASIC6.56□□□□□ -1.36
SYNE1Q8NF91 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 KRT18P6-201ENST00000555540 1265 ntBASIC6.56□□□□□ -1.36
SYNE1Q8NF91 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 SMUG1P1-201ENST00000590640 811 ntBASIC6.56□□□□□ -1.36
SYNE1Q8NF91 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 AC004687.1-201ENST00000579003 1625 ntBASIC6.56□□□□□ -1.36
SYNE1Q8NF91 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 SPI1-203ENST00000533030 661 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 MIR663A-201ENST00000385250 93 ntBASIC6.56□□□□□ -1.36
SYNE1Q8NF91 KRT19P1-201ENST00000405746 1186 ntBASIC6.56□□□□□ -1.36
SYNE1Q8NF91 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 KLF13-207ENST00000560473 489 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 GPX1P1-201ENST00000388829 606 ntBASIC6.56□□□□□ -1.36
SYNE1Q8NF91 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE1Q8NF91 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE1Q8NF91 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE1Q8NF91 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNE1Q8NF91 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE1Q8NF91 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE1Q8NF91 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNE1Q8NF91 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms