Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGBD3Q8N328 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGBD3Q8N328 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
PGBD3Q8N328 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.8■■□□□ 1.08
PGBD3Q8N328 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGBD3Q8N328 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PGBD3Q8N328 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGBD3Q8N328 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.79■■□□□ 1.08
PGBD3Q8N328 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD3Q8N328 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PGBD3Q8N328 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD3Q8N328 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PGBD3Q8N328 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD3Q8N328 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD3Q8N328 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD3Q8N328 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
PGBD3Q8N328 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PGBD3Q8N328 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PGBD3Q8N328 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD3Q8N328 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD3Q8N328 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD3Q8N328 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD3Q8N328 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PGBD3Q8N328 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD3Q8N328 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PGBD3Q8N328 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD3Q8N328 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD3Q8N328 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
PGBD3Q8N328 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD3Q8N328 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.78■■□□□ 1.08
PGBD3Q8N328 MFSD11-216ENST00000590393 1141 ntBASIC21.78■■□□□ 1.08
PGBD3Q8N328 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PGBD3Q8N328 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PGBD3Q8N328 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD3Q8N328 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD3Q8N328 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD3Q8N328 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD3Q8N328 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PGBD3Q8N328 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.77■■□□□ 1.08
PGBD3Q8N328 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.77■■□□□ 1.08
PGBD3Q8N328 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PGBD3Q8N328 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PGBD3Q8N328 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.77■■□□□ 1.08
PGBD3Q8N328 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.77■■□□□ 1.08
PGBD3Q8N328 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PGBD3Q8N328 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PGBD3Q8N328 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PGBD3Q8N328 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
PGBD3Q8N328 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PGBD3Q8N328 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.76■■□□□ 1.07
PGBD3Q8N328 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PGBD3Q8N328 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.76■■□□□ 1.07
PGBD3Q8N328 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PGBD3Q8N328 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.76■■□□□ 1.07
PGBD3Q8N328 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PGBD3Q8N328 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGBD3Q8N328 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGBD3Q8N328 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGBD3Q8N328 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGBD3Q8N328 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGBD3Q8N328 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PGBD3Q8N328 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PGBD3Q8N328 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.76■■□□□ 1.07
PGBD3Q8N328 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PGBD3Q8N328 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PGBD3Q8N328 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PGBD3Q8N328 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PGBD3Q8N328 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.75■■□□□ 1.07
PGBD3Q8N328 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.75■■□□□ 1.07
PGBD3Q8N328 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.75■■□□□ 1.07
PGBD3Q8N328 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.75■■□□□ 1.07
PGBD3Q8N328 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.75■■□□□ 1.07
PGBD3Q8N328 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.75■■□□□ 1.07
PGBD3Q8N328 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PGBD3Q8N328 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.75■■□□□ 1.07
PGBD3Q8N328 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
PGBD3Q8N328 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.74■■□□□ 1.07
PGBD3Q8N328 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PGBD3Q8N328 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PGBD3Q8N328 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.74■■□□□ 1.07
PGBD3Q8N328 AC007322.1-201ENST00000426983 750 ntBASIC21.74■■□□□ 1.07
PGBD3Q8N328 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.74■■□□□ 1.07
PGBD3Q8N328 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PGBD3Q8N328 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.74■■□□□ 1.07
PGBD3Q8N328 UBE2DNL-204ENST00000602536 740 ntBASIC21.74■■□□□ 1.07
PGBD3Q8N328 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.74■■□□□ 1.07
PGBD3Q8N328 AC231657.2-201ENST00000624556 255 ntBASIC21.74■■□□□ 1.07
PGBD3Q8N328 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.74■■□□□ 1.07
PGBD3Q8N328 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PGBD3Q8N328 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PGBD3Q8N328 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PGBD3Q8N328 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PGBD3Q8N328 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PGBD3Q8N328 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PGBD3Q8N328 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PGBD3Q8N328 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
PGBD3Q8N328 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PGBD3Q8N328 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
PGBD3Q8N328 AL121832.2-201ENST00000610979 668 ntBASIC21.73■■□□□ 1.07
PGBD3Q8N328 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms