Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Alms1Q8K4E0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.67■□□□□ 0.58
Alms1Q8K4E0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Alms1Q8K4E0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Alms1Q8K4E0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.66■□□□□ 0.58
Alms1Q8K4E0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alms1Q8K4E0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Alms1Q8K4E0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Alms1Q8K4E0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.66■□□□□ 0.58
Alms1Q8K4E0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alms1Q8K4E0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alms1Q8K4E0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alms1Q8K4E0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Alms1Q8K4E0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alms1Q8K4E0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Alms1Q8K4E0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alms1Q8K4E0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alms1Q8K4E0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
Alms1Q8K4E0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Alms1Q8K4E0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.65■□□□□ 0.58
Alms1Q8K4E0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Alms1Q8K4E0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Alms1Q8K4E0 AA386476-201ENSMUST00000098781 1665 ntBASIC18.65■□□□□ 0.58
Alms1Q8K4E0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.64■□□□□ 0.58
Alms1Q8K4E0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Alms1Q8K4E0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Alms1Q8K4E0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Alms1Q8K4E0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Alms1Q8K4E0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Alms1Q8K4E0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.64■□□□□ 0.58
Alms1Q8K4E0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alms1Q8K4E0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Alms1Q8K4E0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alms1Q8K4E0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Alms1Q8K4E0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.64■□□□□ 0.57
Alms1Q8K4E0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alms1Q8K4E0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Alms1Q8K4E0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.63■□□□□ 0.57
Alms1Q8K4E0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Alms1Q8K4E0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Alms1Q8K4E0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.63■□□□□ 0.57
Alms1Q8K4E0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alms1Q8K4E0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alms1Q8K4E0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alms1Q8K4E0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.63■□□□□ 0.57
Alms1Q8K4E0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alms1Q8K4E0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alms1Q8K4E0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alms1Q8K4E0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alms1Q8K4E0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alms1Q8K4E0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alms1Q8K4E0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.62■□□□□ 0.57
Alms1Q8K4E0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Alms1Q8K4E0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.62■□□□□ 0.57
Alms1Q8K4E0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alms1Q8K4E0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.62■□□□□ 0.57
Alms1Q8K4E0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.62■□□□□ 0.57
Alms1Q8K4E0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alms1Q8K4E0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alms1Q8K4E0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alms1Q8K4E0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Alms1Q8K4E0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alms1Q8K4E0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Alms1Q8K4E0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.62■□□□□ 0.57
Alms1Q8K4E0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.62■□□□□ 0.57
Alms1Q8K4E0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Alms1Q8K4E0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alms1Q8K4E0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alms1Q8K4E0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alms1Q8K4E0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alms1Q8K4E0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alms1Q8K4E0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alms1Q8K4E0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Alms1Q8K4E0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alms1Q8K4E0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alms1Q8K4E0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alms1Q8K4E0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Alms1Q8K4E0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alms1Q8K4E0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alms1Q8K4E0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Alms1Q8K4E0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Alms1Q8K4E0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.6■□□□□ 0.57
Alms1Q8K4E0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alms1Q8K4E0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Alms1Q8K4E0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Alms1Q8K4E0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.6■□□□□ 0.57
Alms1Q8K4E0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Alms1Q8K4E0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Alms1Q8K4E0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alms1Q8K4E0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Alms1Q8K4E0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Alms1Q8K4E0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.59■□□□□ 0.57
Alms1Q8K4E0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alms1Q8K4E0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alms1Q8K4E0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alms1Q8K4E0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Alms1Q8K4E0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alms1Q8K4E0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Alms1Q8K4E0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alms1Q8K4E0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms