Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE9Q8IYJ1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.23■□□□□ 0.99
CPNE9Q8IYJ1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE9Q8IYJ1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CPNE9Q8IYJ1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CPNE9Q8IYJ1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE9Q8IYJ1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 AC126544.1-201ENST00000580842 1059 ntBASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 AC008764.7-201ENST00000593779 1081 ntBASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE9Q8IYJ1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.21■□□□□ 0.99
CPNE9Q8IYJ1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE9Q8IYJ1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE9Q8IYJ1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.21■□□□□ 0.99
CPNE9Q8IYJ1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE9Q8IYJ1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.21■□□□□ 0.99
CPNE9Q8IYJ1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.21■□□□□ 0.99
CPNE9Q8IYJ1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CPNE9Q8IYJ1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
CPNE9Q8IYJ1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.21■□□□□ 0.99
CPNE9Q8IYJ1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE9Q8IYJ1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE9Q8IYJ1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE9Q8IYJ1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.21■□□□□ 0.99
CPNE9Q8IYJ1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE9Q8IYJ1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.2■□□□□ 0.99
CPNE9Q8IYJ1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE9Q8IYJ1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE9Q8IYJ1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CPNE9Q8IYJ1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE9Q8IYJ1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE9Q8IYJ1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE9Q8IYJ1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE9Q8IYJ1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CPNE9Q8IYJ1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.2■□□□□ 0.98
CPNE9Q8IYJ1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE9Q8IYJ1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE9Q8IYJ1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.19■□□□□ 0.98
CPNE9Q8IYJ1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.19■□□□□ 0.98
CPNE9Q8IYJ1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE9Q8IYJ1 AC099791.1-201ENST00000416440 715 ntBASIC21.19■□□□□ 0.98
CPNE9Q8IYJ1 AP001330.3-201ENST00000520123 633 ntBASIC21.19■□□□□ 0.98
CPNE9Q8IYJ1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.19■□□□□ 0.98
CPNE9Q8IYJ1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.19■□□□□ 0.98
CPNE9Q8IYJ1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.19■□□□□ 0.98
CPNE9Q8IYJ1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.19■□□□□ 0.98
CPNE9Q8IYJ1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE9Q8IYJ1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.19■□□□□ 0.98
CPNE9Q8IYJ1 AC026471.6-201ENST00000622954 1905 ntBASIC21.19■□□□□ 0.98
CPNE9Q8IYJ1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.19■□□□□ 0.98
CPNE9Q8IYJ1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.19■□□□□ 0.98
CPNE9Q8IYJ1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.18■□□□□ 0.98
CPNE9Q8IYJ1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE9Q8IYJ1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE9Q8IYJ1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE9Q8IYJ1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE9Q8IYJ1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.18■□□□□ 0.98
CPNE9Q8IYJ1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE9Q8IYJ1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE9Q8IYJ1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.18■□□□□ 0.98
CPNE9Q8IYJ1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE9Q8IYJ1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CPNE9Q8IYJ1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE9Q8IYJ1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE9Q8IYJ1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE9Q8IYJ1 EDA-201ENST00000338901 1233 ntBASIC21.17■□□□□ 0.98
CPNE9Q8IYJ1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE9Q8IYJ1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE9Q8IYJ1 AC027682.1-201ENST00000562846 899 ntBASIC21.17■□□□□ 0.98
CPNE9Q8IYJ1 AC133561.4-201ENST00000566112 224 ntBASIC21.17■□□□□ 0.98
CPNE9Q8IYJ1 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.17■□□□□ 0.98
CPNE9Q8IYJ1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.17■□□□□ 0.98
CPNE9Q8IYJ1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE9Q8IYJ1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE9Q8IYJ1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE9Q8IYJ1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE9Q8IYJ1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE9Q8IYJ1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE9Q8IYJ1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CPNE9Q8IYJ1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.16■□□□□ 0.98
CPNE9Q8IYJ1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.16■□□□□ 0.98
CPNE9Q8IYJ1 IGHV3-19-201ENST00000521488 291 ntBASIC21.16■□□□□ 0.98
CPNE9Q8IYJ1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.16■□□□□ 0.98
CPNE9Q8IYJ1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE9Q8IYJ1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms