Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.35■□□□□ 0.37
C9orf139Q6ZV77 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
C9orf139Q6ZV77 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.35■□□□□ 0.37
C9orf139Q6ZV77 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.35■□□□□ 0.37
C9orf139Q6ZV77 AP001160.3-201ENST00000601484 763 ntBASIC17.35■□□□□ 0.37
C9orf139Q6ZV77 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.35■□□□□ 0.37
C9orf139Q6ZV77 AC104771.1-201ENST00000603335 964 ntBASIC17.35■□□□□ 0.37
C9orf139Q6ZV77 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf139Q6ZV77 AC231657.2-201ENST00000624556 255 ntBASIC17.35■□□□□ 0.37
C9orf139Q6ZV77 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf139Q6ZV77 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf139Q6ZV77 AP004607.7-201ENST00000527152 1677 ntBASIC17.35■□□□□ 0.37
C9orf139Q6ZV77 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf139Q6ZV77 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf139Q6ZV77 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf139Q6ZV77 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf139Q6ZV77 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf139Q6ZV77 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.34■□□□□ 0.37
C9orf139Q6ZV77 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf139Q6ZV77 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf139Q6ZV77 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
C9orf139Q6ZV77 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.34■□□□□ 0.37
C9orf139Q6ZV77 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.34■□□□□ 0.37
C9orf139Q6ZV77 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.34■□□□□ 0.37
C9orf139Q6ZV77 KRT18P20-201ENST00000548986 1279 ntBASIC17.34■□□□□ 0.37
C9orf139Q6ZV77 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf139Q6ZV77 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.34■□□□□ 0.37
C9orf139Q6ZV77 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.34■□□□□ 0.37
C9orf139Q6ZV77 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf139Q6ZV77 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C9orf139Q6ZV77 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C9orf139Q6ZV77 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C9orf139Q6ZV77 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
C9orf139Q6ZV77 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C9orf139Q6ZV77 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.33■□□□□ 0.37
C9orf139Q6ZV77 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C9orf139Q6ZV77 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 AC010141.2-201ENST00000452426 721 ntBASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 AC138907.5-202ENST00000569484 235 ntBASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 UBE2DNL-204ENST00000602536 740 ntBASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
C9orf139Q6ZV77 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 MIR663A-201ENST00000385250 93 ntBASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 MYCNOS-205ENST00000641950 531 ntBASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
C9orf139Q6ZV77 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 DUX4L16-201ENST00000555130 1264 ntBASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 AL109923.1-201ENST00000618799 583 ntBASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf139Q6ZV77 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf139Q6ZV77 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf139Q6ZV77 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf139Q6ZV77 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms