Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00242Q5T6M2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00242Q5T6M2 AC104564.3-201ENST00000582367 638 ntBASIC14.66□□□□□ -0.06
LINC00242Q5T6M2 AL499627.2-201ENST00000606283 725 ntBASIC14.66□□□□□ -0.06
LINC00242Q5T6M2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC00242Q5T6M2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00242Q5T6M2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
LINC00242Q5T6M2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00242Q5T6M2 AC026471.6-201ENST00000622954 1905 ntBASIC14.66□□□□□ -0.06
LINC00242Q5T6M2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00242Q5T6M2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LINC00242Q5T6M2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LINC00242Q5T6M2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 BX664725.1-201ENST00000438252 379 ntBASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC00242Q5T6M2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
LINC00242Q5T6M2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 AC079089.2-201ENST00000531211 1277 ntBASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00242Q5T6M2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00242Q5T6M2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00242Q5T6M2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00242Q5T6M2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00242Q5T6M2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00242Q5T6M2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00242Q5T6M2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00242Q5T6M2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00242Q5T6M2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00242Q5T6M2 AC092028.1-203ENST00000608262 953 ntBASIC14.62□□□□□ -0.07
LINC00242Q5T6M2 AC012354.3-201ENST00000623734 483 ntBASIC14.62□□□□□ -0.07
LINC00242Q5T6M2 AL031602.1-201ENST00000633169 911 ntBASIC14.62□□□□□ -0.07
LINC00242Q5T6M2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LINC00242Q5T6M2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00242Q5T6M2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00242Q5T6M2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00242Q5T6M2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00242Q5T6M2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms