Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CTSL3PQ5NE16 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTSL3PQ5NE16 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTSL3PQ5NE16 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTSL3PQ5NE16 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CTSL3PQ5NE16 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.23■□□□□ 0.99
CTSL3PQ5NE16 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTSL3PQ5NE16 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTSL3PQ5NE16 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTSL3PQ5NE16 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTSL3PQ5NE16 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CTSL3PQ5NE16 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTSL3PQ5NE16 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CTSL3PQ5NE16 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTSL3PQ5NE16 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
CTSL3PQ5NE16 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CTSL3PQ5NE16 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.22■□□□□ 0.99
CTSL3PQ5NE16 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
CTSL3PQ5NE16 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CTSL3PQ5NE16 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CTSL3PQ5NE16 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTSL3PQ5NE16 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTSL3PQ5NE16 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CTSL3PQ5NE16 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTSL3PQ5NE16 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTSL3PQ5NE16 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTSL3PQ5NE16 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.21■□□□□ 0.99
CTSL3PQ5NE16 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.21■□□□□ 0.99
CTSL3PQ5NE16 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTSL3PQ5NE16 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.21■□□□□ 0.99
CTSL3PQ5NE16 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTSL3PQ5NE16 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTSL3PQ5NE16 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTSL3PQ5NE16 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.2■□□□□ 0.99
CTSL3PQ5NE16 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 AL034346.1-201ENST00000568244 1277 ntBASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 AC005837.3-201ENST00000612163 286 ntBASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 CLDN5-201ENST00000403084 2357 ntBASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSL3PQ5NE16 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.19■□□□□ 0.98
CTSL3PQ5NE16 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CTSL3PQ5NE16 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.19■□□□□ 0.98
CTSL3PQ5NE16 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSL3PQ5NE16 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.19■□□□□ 0.98
CTSL3PQ5NE16 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.19■□□□□ 0.98
CTSL3PQ5NE16 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.19■□□□□ 0.98
CTSL3PQ5NE16 MIR638-201ENST00000385237 100 ntBASIC21.19■□□□□ 0.98
CTSL3PQ5NE16 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.19■□□□□ 0.98
CTSL3PQ5NE16 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.19■□□□□ 0.98
CTSL3PQ5NE16 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.19■□□□□ 0.98
CTSL3PQ5NE16 AC142381.2-201ENST00000566120 298 ntBASIC21.19■□□□□ 0.98
CTSL3PQ5NE16 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSL3PQ5NE16 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CTSL3PQ5NE16 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.19■□□□□ 0.98
CTSL3PQ5NE16 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSL3PQ5NE16 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTSL3PQ5NE16 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CTSL3PQ5NE16 MIR572-201ENST00000384983 95 ntBASIC21.18■□□□□ 0.98
CTSL3PQ5NE16 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.18■□□□□ 0.98
CTSL3PQ5NE16 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.18■□□□□ 0.98
CTSL3PQ5NE16 AC105233.4-201ENST00000642045 216 ntBASIC21.18■□□□□ 0.98
CTSL3PQ5NE16 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CTSL3PQ5NE16 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.18■□□□□ 0.98
CTSL3PQ5NE16 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.18■□□□□ 0.98
CTSL3PQ5NE16 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CTSL3PQ5NE16 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.17■□□□□ 0.98
CTSL3PQ5NE16 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTSL3PQ5NE16 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTSL3PQ5NE16 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTSL3PQ5NE16 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.17■□□□□ 0.98
CTSL3PQ5NE16 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.17■□□□□ 0.98
CTSL3PQ5NE16 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTSL3PQ5NE16 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.17■□□□□ 0.98
CTSL3PQ5NE16 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTSL3PQ5NE16 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTSL3PQ5NE16 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTSL3PQ5NE16 AC007375.3-201ENST00000600936 2314 ntBASIC21.16■□□□□ 0.98
CTSL3PQ5NE16 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSL3PQ5NE16 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSL3PQ5NE16 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
CTSL3PQ5NE16 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSL3PQ5NE16 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTSL3PQ5NE16 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSL3PQ5NE16 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.16■□□□□ 0.98
CTSL3PQ5NE16 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms