Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.28■■□□□ 1.32
CBWD3Q5JTY5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CBWD3Q5JTY5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CBWD3Q5JTY5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CBWD3Q5JTY5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CBWD3Q5JTY5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CBWD3Q5JTY5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CBWD3Q5JTY5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CBWD3Q5JTY5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CBWD3Q5JTY5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CBWD3Q5JTY5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.27■■□□□ 1.32
CBWD3Q5JTY5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CBWD3Q5JTY5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.27■■□□□ 1.32
CBWD3Q5JTY5 AP004607.7-201ENST00000527152 1677 ntBASIC23.27■■□□□ 1.32
CBWD3Q5JTY5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CBWD3Q5JTY5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.27■■□□□ 1.32
CBWD3Q5JTY5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CBWD3Q5JTY5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CBWD3Q5JTY5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CBWD3Q5JTY5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.26■■□□□ 1.31
CBWD3Q5JTY5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CBWD3Q5JTY5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CBWD3Q5JTY5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.26■■□□□ 1.31
CBWD3Q5JTY5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CBWD3Q5JTY5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CBWD3Q5JTY5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
CBWD3Q5JTY5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.26■■□□□ 1.31
CBWD3Q5JTY5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CBWD3Q5JTY5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.26■■□□□ 1.31
CBWD3Q5JTY5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
CBWD3Q5JTY5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CBWD3Q5JTY5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CBWD3Q5JTY5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CBWD3Q5JTY5 AC007375.3-201ENST00000600936 2314 ntBASIC23.25■■□□□ 1.31
CBWD3Q5JTY5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.25■■□□□ 1.31
CBWD3Q5JTY5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.25■■□□□ 1.31
CBWD3Q5JTY5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
CBWD3Q5JTY5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CBWD3Q5JTY5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.25■■□□□ 1.31
CBWD3Q5JTY5 MIR638-201ENST00000385237 100 ntBASIC23.25■■□□□ 1.31
CBWD3Q5JTY5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CBWD3Q5JTY5 AC005837.3-201ENST00000612163 286 ntBASIC23.25■■□□□ 1.31
CBWD3Q5JTY5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CBWD3Q5JTY5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CBWD3Q5JTY5 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.25■■□□□ 1.31
CBWD3Q5JTY5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
CBWD3Q5JTY5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CBWD3Q5JTY5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CBWD3Q5JTY5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.24■■□□□ 1.31
CBWD3Q5JTY5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CBWD3Q5JTY5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.24■■□□□ 1.31
CBWD3Q5JTY5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.24■■□□□ 1.31
CBWD3Q5JTY5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.24■■□□□ 1.31
CBWD3Q5JTY5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CBWD3Q5JTY5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CBWD3Q5JTY5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CBWD3Q5JTY5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CBWD3Q5JTY5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CBWD3Q5JTY5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CBWD3Q5JTY5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.23■■□□□ 1.31
CBWD3Q5JTY5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CBWD3Q5JTY5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.23■■□□□ 1.31
CBWD3Q5JTY5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.23■■□□□ 1.31
CBWD3Q5JTY5 AC142381.2-201ENST00000566120 298 ntBASIC23.23■■□□□ 1.31
CBWD3Q5JTY5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CBWD3Q5JTY5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CBWD3Q5JTY5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CBWD3Q5JTY5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CBWD3Q5JTY5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.22■■□□□ 1.31
CBWD3Q5JTY5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.22■■□□□ 1.31
CBWD3Q5JTY5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.22■■□□□ 1.31
CBWD3Q5JTY5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.22■■□□□ 1.31
CBWD3Q5JTY5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.22■■□□□ 1.31
CBWD3Q5JTY5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.22■■□□□ 1.31
CBWD3Q5JTY5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CBWD3Q5JTY5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CBWD3Q5JTY5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CBWD3Q5JTY5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CBWD3Q5JTY5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.21■■□□□ 1.31
CBWD3Q5JTY5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.21■■□□□ 1.31
CBWD3Q5JTY5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.21■■□□□ 1.31
CBWD3Q5JTY5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CBWD3Q5JTY5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.21■■□□□ 1.31
CBWD3Q5JTY5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CBWD3Q5JTY5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.21■■□□□ 1.31
CBWD3Q5JTY5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.2■■□□□ 1.3
CBWD3Q5JTY5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CBWD3Q5JTY5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.2■■□□□ 1.3
CBWD3Q5JTY5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.2■■□□□ 1.3
CBWD3Q5JTY5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.2■■□□□ 1.3
CBWD3Q5JTY5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.2■■□□□ 1.3
CBWD3Q5JTY5 MIR572-201ENST00000384983 95 ntBASIC23.2■■□□□ 1.3
CBWD3Q5JTY5 AC105233.4-201ENST00000642045 216 ntBASIC23.2■■□□□ 1.3
CBWD3Q5JTY5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CBWD3Q5JTY5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CBWD3Q5JTY5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CBWD3Q5JTY5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CBWD3Q5JTY5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
CBWD3Q5JTY5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CBWD3Q5JTY5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms