Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 AL031432.3-201ENST00000607698 485 ntBASIC16.65■□□□□ 0.26
TM4SF20Q53R12 AC005837.3-201ENST00000612163 286 ntBASIC16.65■□□□□ 0.26
TM4SF20Q53R12 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF20Q53R12 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF20Q53R12 LINC00565-201ENST00000562710 2331 ntBASIC16.65■□□□□ 0.26
TM4SF20Q53R12 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF20Q53R12 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF20Q53R12 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TM4SF20Q53R12 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF20Q53R12 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TM4SF20Q53R12 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF20Q53R12 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF20Q53R12 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF20Q53R12 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
TM4SF20Q53R12 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF20Q53R12 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.64■□□□□ 0.26
TM4SF20Q53R12 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 AC127496.7-201ENST00000625110 1798 ntBASIC16.64■□□□□ 0.25
TM4SF20Q53R12 AC080038.3-201ENST00000623346 1952 ntBASIC16.64■□□□□ 0.25
TM4SF20Q53R12 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 AC027682.1-201ENST00000562846 899 ntBASIC16.64■□□□□ 0.25
TM4SF20Q53R12 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 AC087239.1-201ENST00000622671 572 ntBASIC16.64■□□□□ 0.25
TM4SF20Q53R12 AL136967.2-201ENST00000623968 743 ntBASIC16.64■□□□□ 0.25
TM4SF20Q53R12 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 AL117328.2-201ENST00000624617 1940 ntBASIC16.64■□□□□ 0.25
TM4SF20Q53R12 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 SLC25A24-204ENST00000569674 2357 ntBASIC16.64■□□□□ 0.25
TM4SF20Q53R12 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF20Q53R12 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF20Q53R12 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TM4SF20Q53R12 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.63■□□□□ 0.25
TM4SF20Q53R12 AC137767.1-201ENST00000602918 1920 ntBASIC16.63■□□□□ 0.25
TM4SF20Q53R12 MIR939-201ENST00000401314 82 ntBASIC16.63■□□□□ 0.25
TM4SF20Q53R12 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.63■□□□□ 0.25
TM4SF20Q53R12 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.63■□□□□ 0.25
TM4SF20Q53R12 AP005435.1-201ENST00000529293 1178 ntBASIC16.63■□□□□ 0.25
TM4SF20Q53R12 AC142381.2-201ENST00000566120 298 ntBASIC16.63■□□□□ 0.25
TM4SF20Q53R12 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TM4SF20Q53R12 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.63■□□□□ 0.25
TM4SF20Q53R12 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TM4SF20Q53R12 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF20Q53R12 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF20Q53R12 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF20Q53R12 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TM4SF20Q53R12 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 AC010141.3-201ENST00000456659 717 ntBASIC16.62■□□□□ 0.25
TM4SF20Q53R12 SUDS3P1-201ENST00000505831 966 ntBASIC16.62■□□□□ 0.25
TM4SF20Q53R12 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 CA15P2-201ENST00000611168 834 ntBASIC16.62■□□□□ 0.25
TM4SF20Q53R12 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TM4SF20Q53R12 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 AC019069.1-201ENST00000610008 1333 ntBASIC16.61■□□□□ 0.25
TM4SF20Q53R12 RASA4CP-201ENST00000424092 1398 ntBASIC16.61■□□□□ 0.25
TM4SF20Q53R12 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF20Q53R12 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms