Protein–RNA interactions for Protein: Q08723

RPN8, 26S proteasome regulatory subunit RPN8, yeastyeast

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN8Q08723 YKR015CYKR015C 1707 nt3.31□□□□□ -1.88
RPN8Q08723 CTK1YKL139W 1587 nt3.31□□□□□ -1.88
RPN8Q08723 YDR250CYDR250C 276 nt3.31□□□□□ -1.88
RPN8Q08723 NKP1YDR383C 717 nt3.31□□□□□ -1.88
RPN8Q08723 YGL258W-AYGL258W-A 234 nt3.31□□□□□ -1.88
RPN8Q08723 MRPS35YGR165W 1038 nt3.31□□□□□ -1.88
RPN8Q08723 ARC15YIL062C 465 nt3.31□□□□□ -1.88
RPN8Q08723 AHP1YLR109W 531 nt3.31□□□□□ -1.88
RPN8Q08723 MOH1YBL049W 417 nt3.31□□□□□ -1.88
RPN8Q08723 YNL013CYNL013C 378 nt3.31□□□□□ -1.88
RPN8Q08723 RPC34YNR003C 954 nt3.31□□□□□ -1.88
RPN8Q08723 TIR2YOR010C 756 nt3.31□□□□□ -1.88
RPN8Q08723 RPN1YHR027C 2982 nt3.31□□□□□ -1.88
RPN8Q08723 PFK26YIL107C 2484 nt3.31□□□□□ -1.88
RPN8Q08723 BUD6YLR319C 2367 nt3.31□□□□□ -1.88
RPN8Q08723 SKP2YNL311C 2292 nt3.31□□□□□ -1.88
RPN8Q08723 TRM1YDR120C 1713 nt3.3□□□□□ -1.88
RPN8Q08723 CLN2YPL256C 1638 nt3.3□□□□□ -1.88
RPN8Q08723 MGR3YMR115W 1506 nt3.3□□□□□ -1.88
RPN8Q08723 TRE2YOR256C 2430 nt3.3□□□□□ -1.88
RPN8Q08723 DSF2YBR007C 2211 nt3.3□□□□□ -1.88
RPN8Q08723 APA2YDR530C 978 nt3.3□□□□□ -1.88
RPN8Q08723 PET54YGR222W 882 nt3.3□□□□□ -1.88
RPN8Q08723 YIR040CYIR040C 333 nt3.3□□□□□ -1.88
RPN8Q08723 YUH1YJR099W 711 nt3.3□□□□□ -1.88
RPN8Q08723 RFC3YNL290W 1023 nt3.3□□□□□ -1.88
RPN8Q08723 TGL3YMR313C 1929 nt3.3□□□□□ -1.88
RPN8Q08723 SLA1YBL007C 3735 nt3.29□□□□□ -1.88
RPN8Q08723 CTH1YDR151C 978 nt3.29□□□□□ -1.88
RPN8Q08723 YDR222WYDR222W 1248 nt3.29□□□□□ -1.88
RPN8Q08723 YDR290WYDR290W 330 nt3.29□□□□□ -1.88
RPN8Q08723 TOS8YGL096W 831 nt3.29□□□□□ -1.88
RPN8Q08723 YHR180WYHR180W 492 nt3.29□□□□□ -1.88
RPN8Q08723 AGE2YIL044C 897 nt3.29□□□□□ -1.88
RPN8Q08723 FMC1YIL098C 468 nt3.29□□□□□ -1.88
RPN8Q08723 RPS28BYLR264W 204 nt3.29□□□□□ -1.88
RPN8Q08723 OXR1YPL196W 822 nt3.29□□□□□ -1.88
RPN8Q08723 PTM1YKL039W 1572 nt3.29□□□□□ -1.88
RPN8Q08723 THR4YCR053W 1545 nt3.29□□□□□ -1.88
RPN8Q08723 ACK1YDL203C 1872 nt3.28□□□□□ -1.88
RPN8Q08723 AUS1YOR011W 4185 nt3.28□□□□□ -1.88
RPN8Q08723 CLG1YGL215W 1359 nt3.28□□□□□ -1.88
RPN8Q08723 FAR1YJL157C 2493 nt3.28□□□□□ -1.88
RPN8Q08723 tF(GAA)DtF(GAA)D 73 nt3.28□□□□□ -1.88
RPN8Q08723 tF(GAA)NtF(GAA)N 73 nt3.28□□□□□ -1.88
RPN8Q08723 MEF1YLR069C 2286 nt3.28□□□□□ -1.88
RPN8Q08723 PMS1YNL082W 2622 nt3.28□□□□□ -1.88
RPN8Q08723 SMI1YGR229C 1518 nt3.28□□□□□ -1.88
RPN8Q08723 PRS5YOL061W 1491 nt3.28□□□□□ -1.88
RPN8Q08723 JIP5YPR169W 1479 nt3.28□□□□□ -1.88
RPN8Q08723 CSR2YPR030W 3366 nt3.28□□□□□ -1.89
RPN8Q08723 SET1YHR119W 3243 nt3.27□□□□□ -1.89
RPN8Q08723 UBP12YJL197W 3765 nt3.27□□□□□ -1.89
RPN8Q08723 ERG9YHR190W 1335 nt3.27□□□□□ -1.89
RPN8Q08723 DET1YDR051C 1005 nt3.27□□□□□ -1.89
RPN8Q08723 RRP8YDR083W 1179 nt3.27□□□□□ -1.89
RPN8Q08723 ERJ5YFR041C 888 nt3.27□□□□□ -1.89
RPN8Q08723 KEG1YFR042W 603 nt3.27□□□□□ -1.89
RPN8Q08723 YSF3YNL138W-A 258 nt3.27□□□□□ -1.89
RPN8Q08723 VAM10YOR068C 345 nt3.27□□□□□ -1.89
RPN8Q08723 VPS33YLR396C 2076 nt3.27□□□□□ -1.89
RPN8Q08723 RAD5YLR032W 3510 nt3.27□□□□□ -1.89
RPN8Q08723 RCY1YJL204C 2523 nt3.26□□□□□ -1.89
RPN8Q08723 YVC1YOR087W 2028 nt3.26□□□□□ -1.89
RPN8Q08723 YCR007CYCR007C 720 nt3.26□□□□□ -1.89
RPN8Q08723 RPL30YGL030W 318 nt3.26□□□□□ -1.89
RPN8Q08723 SIC1YLR079W 855 nt3.26□□□□□ -1.89
RPN8Q08723 PSY3YLR376C 729 nt3.26□□□□□ -1.89
RPN8Q08723 AAH1YNL141W 1044 nt3.26□□□□□ -1.89
RPN8Q08723 MCM16YPR046W 546 nt3.26□□□□□ -1.89
RPN8Q08723 YPR142CYPR142C 564 nt3.26□□□□□ -1.89
RPN8Q08723 TIM12YBR091C 330 nt3.26□□□□□ -1.89
RPN8Q08723 SSE2YBR169C 2082 nt3.26□□□□□ -1.89
RPN8Q08723 MSR1YHR091C 1932 nt3.25□□□□□ -1.89
RPN8Q08723 LCB5YLR260W 2064 nt3.25□□□□□ -1.89
RPN8Q08723 VPS27YNR006W 1869 nt3.25□□□□□ -1.89
RPN8Q08723 TCP1YDR212W 1680 nt3.25□□□□□ -1.89
RPN8Q08723 COX23YHR116W 456 nt3.25□□□□□ -1.89
RPN8Q08723 IMP3YHR148W 552 nt3.25□□□□□ -1.89
RPN8Q08723 YLR444CYLR444C 303 nt3.25□□□□□ -1.89
RPN8Q08723 MRPL51YPR100W 423 nt3.25□□□□□ -1.89
RPN8Q08723 snR42snR42 351 nt3.25□□□□□ -1.89
RPN8Q08723 RPA135YPR010C 3612 nt3.25□□□□□ -1.89
RPN8Q08723 STU2YLR045C 2667 nt3.25□□□□□ -1.89
RPN8Q08723 RRI1YDL216C 1323 nt3.24□□□□□ -1.89
RPN8Q08723 ARP4YJL081C 1470 nt3.24□□□□□ -1.89
RPN8Q08723 PSF1YDR013W 627 nt3.24□□□□□ -1.89
RPN8Q08723 YGR017WYGR017W 894 nt3.24□□□□□ -1.89
RPN8Q08723 MED11YMR112C 396 nt3.24□□□□□ -1.89
RPN8Q08723 YMR178WYMR178W 825 nt3.24□□□□□ -1.89
RPN8Q08723 RUF20RUF20 443 nt3.24□□□□□ -1.89
RPN8Q08723 YNL162W-AYNL162W-A 219 nt3.24□□□□□ -1.89
RPN8Q08723 YOL166CYOL166C 339 nt3.24□□□□□ -1.89
RPN8Q08723 YOR186WYOR186W 435 nt3.24□□□□□ -1.89
RPN8Q08723 HSH49YOR319W 642 nt3.24□□□□□ -1.89
RPN8Q08723 RPS11BYBR048W 471 nt3.24□□□□□ -1.89
RPN8Q08723 ENA2YDR039C 3276 nt3.24□□□□□ -1.89
RPN8Q08723 ENA1YDR040C 3276 nt3.24□□□□□ -1.89
RPN8Q08723 GCN1YGL195W 8019 nt3.24□□□□□ -1.89
RPN8Q08723 ROM1YGR070W 3468 nt3.24□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 23.5 ms