Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 YIR021W-AYIR021W-A 213 nt3.86□□□□□ -1.79
VPS38Q05919 VPS25YJR102C 609 nt3.86□□□□□ -1.79
VPS38Q05919 YLR169WYLR169W 354 nt3.86□□□□□ -1.79
VPS38Q05919 YLR365WYLR365W 333 nt3.86□□□□□ -1.79
VPS38Q05919 SUR1YPL057C 1149 nt3.86□□□□□ -1.79
VPS38Q05919 YPR108W-AYPR108W-A 213 nt3.86□□□□□ -1.79
VPS38Q05919 MRPL27YBR282W 441 nt3.86□□□□□ -1.79
VPS38Q05919 APA1YCL050C 966 nt3.86□□□□□ -1.79
VPS38Q05919 SUP45YBR143C 1314 nt3.86□□□□□ -1.79
VPS38Q05919 NTA1YJR062C 1374 nt3.86□□□□□ -1.79
VPS38Q05919 ISW2YOR304W 3363 nt3.86□□□□□ -1.79
VPS38Q05919 SPA2YLL021W 4401 nt3.85□□□□□ -1.79
VPS38Q05919 CPR1YDR155C 489 nt3.85□□□□□ -1.79
VPS38Q05919 MSW1YDR268W 1140 nt3.85□□□□□ -1.79
VPS38Q05919 FMP10YER182W 735 nt3.85□□□□□ -1.79
VPS38Q05919 COX2Q0250 756 nt3.85□□□□□ -1.79
VPS38Q05919 RTT109YLL002W 1311 nt3.85□□□□□ -1.79
VPS38Q05919 YPR148CYPR148C 1308 nt3.85□□□□□ -1.79
VPS38Q05919 MSS4YDR208W 2340 nt3.84□□□□□ -1.79
VPS38Q05919 SEG1YMR086W 2883 nt3.84□□□□□ -1.79
VPS38Q05919 RPS18AYDR450W 441 nt3.84□□□□□ -1.79
VPS38Q05919 MEI4YER044C-A 1227 nt3.84□□□□□ -1.79
VPS38Q05919 YGL138CYGL138C 1038 nt3.84□□□□□ -1.79
VPS38Q05919 GTT1YIR038C 705 nt3.84□□□□□ -1.79
VPS38Q05919 YJR128WYJR128W 360 nt3.84□□□□□ -1.79
VPS38Q05919 COX19YLL018C-A 297 nt3.84□□□□□ -1.79
VPS38Q05919 UFE1YOR075W 1041 nt3.84□□□□□ -1.79
VPS38Q05919 YIG1YPL201C 1386 nt3.84□□□□□ -1.79
VPS38Q05919 SLI1YGR212W 1407 nt3.84□□□□□ -1.79
VPS38Q05919 TCB3YML072C 4638 nt3.84□□□□□ -1.8
VPS38Q05919 YRM1YOR172W 2361 nt3.83□□□□□ -1.8
VPS38Q05919 KIP3YGL216W 2418 nt3.83□□□□□ -1.8
VPS38Q05919 YDL157CYDL157C 357 nt3.83□□□□□ -1.8
VPS38Q05919 ENT3YJR125C 1227 nt3.83□□□□□ -1.8
VPS38Q05919 YAR075WYAR075W 474 nt3.83□□□□□ -1.8
VPS38Q05919 RAD14YMR201C 1116 nt3.83□□□□□ -1.8
VPS38Q05919 YNL226WYNL226W 411 nt3.83□□□□□ -1.8
VPS38Q05919 TRM112YNR046W 408 nt3.83□□□□□ -1.8
VPS38Q05919 LDS2YOL047C 1071 nt3.83□□□□□ -1.8
VPS38Q05919 IDH2YOR136W 1110 nt3.83□□□□□ -1.8
VPS38Q05919 YBR137WYBR137W 540 nt3.83□□□□□ -1.8
VPS38Q05919 PEP7YDR323C 1548 nt3.83□□□□□ -1.8
VPS38Q05919 TAF6YGL112C 1551 nt3.83□□□□□ -1.8
VPS38Q05919 ULP1YPL020C 1866 nt3.83□□□□□ -1.8
VPS38Q05919 YPL109CYPL109C 1974 nt3.83□□□□□ -1.8
VPS38Q05919 YJR061WYJR061W 2808 nt3.83□□□□□ -1.8
VPS38Q05919 SMC3YJL074C 3693 nt3.82□□□□□ -1.8
VPS38Q05919 XRS2YDR369C 2565 nt3.82□□□□□ -1.8
VPS38Q05919 UTP25YIL091C 2166 nt3.82□□□□□ -1.8
VPS38Q05919 PBI1YPL272C 1554 nt3.82□□□□□ -1.8
VPS38Q05919 MAK11YKL021C 1407 nt3.82□□□□□ -1.8
VPS38Q05919 YFL051CYFL051C 483 nt3.82□□□□□ -1.8
VPS38Q05919 TMA19YKL056C 504 nt3.82□□□□□ -1.8
VPS38Q05919 YBL062WYBL062W 381 nt3.82□□□□□ -1.8
VPS38Q05919 DDP1YOR163W 567 nt3.82□□□□□ -1.8
VPS38Q05919 RET3YPL010W 570 nt3.82□□□□□ -1.8
VPS38Q05919 SNT1YCR033W 3681 nt3.82□□□□□ -1.8
VPS38Q05919 YHR202WYHR202W 1809 nt3.81□□□□□ -1.8
VPS38Q05919 KRI1YNL308C 1776 nt3.81□□□□□ -1.8
VPS38Q05919 APL4YPR029C 2499 nt3.81□□□□□ -1.8
VPS38Q05919 YLR352WYLR352W 2424 nt3.81□□□□□ -1.8
VPS38Q05919 TSC13YDL015C 933 nt3.81□□□□□ -1.8
VPS38Q05919 SNU23YDL098C 585 nt3.81□□□□□ -1.8
VPS38Q05919 YDR535CYDR535C 501 nt3.81□□□□□ -1.8
VPS38Q05919 YAL064WYAL064W 285 nt3.81□□□□□ -1.8
VPS38Q05919 YNL319WYNL319W 441 nt3.81□□□□□ -1.8
VPS38Q05919 TIR2YOR010C 756 nt3.81□□□□□ -1.8
VPS38Q05919 KRE5YOR336W 4098 nt3.81□□□□□ -1.8
VPS38Q05919 YOL019WYOL019W 1656 nt3.81□□□□□ -1.8
VPS38Q05919 SST2YLR452C 2097 nt3.8□□□□□ -1.8
VPS38Q05919 YGR117CYGR117C 1431 nt3.8□□□□□ -1.8
VPS38Q05919 GYP6YJL044C 1377 nt3.8□□□□□ -1.8
VPS38Q05919 CUE3YGL110C 1875 nt3.8□□□□□ -1.8
VPS38Q05919 RPA14YDR156W 414 nt3.8□□□□□ -1.8
VPS38Q05919 CNN1YFR046C 1086 nt3.8□□□□□ -1.8
VPS38Q05919 PEX14YGL153W 1026 nt3.8□□□□□ -1.8
VPS38Q05919 PSF2YJL072C 642 nt3.8□□□□□ -1.8
VPS38Q05919 CMC1YKL137W 336 nt3.8□□□□□ -1.8
VPS38Q05919 YMR310CYMR310C 954 nt3.8□□□□□ -1.8
VPS38Q05919 RPL18AYOL120C 561 nt3.8□□□□□ -1.8
VPS38Q05919 YPR078CYPR078C 1119 nt3.8□□□□□ -1.8
VPS38Q05919 ERV15YBR210W 429 nt3.8□□□□□ -1.8
VPS38Q05919 URA2YJL130C 6645 nt3.8□□□□□ -1.8
VPS38Q05919 ORC4YPR162C 1590 nt3.8□□□□□ -1.8
VPS38Q05919 SLS1YLR139C 1932 nt3.8□□□□□ -1.8
VPS38Q05919 DIT2YDR402C 1470 nt3.79□□□□□ -1.8
VPS38Q05919 ATG21YPL100W 1491 nt3.79□□□□□ -1.8
VPS38Q05919 ACK1YDL203C 1872 nt3.79□□□□□ -1.8
VPS38Q05919 NAT1YDL040C 2565 nt3.79□□□□□ -1.8
VPS38Q05919 YGR111WYGR111W 1203 nt3.79□□□□□ -1.8
VPS38Q05919 YHL026CYHL026C 948 nt3.79□□□□□ -1.8
VPS38Q05919 CDC12YHR107C 1224 nt3.79□□□□□ -1.8
VPS38Q05919 POL32YJR043C 1053 nt3.79□□□□□ -1.8
VPS38Q05919 ARG80YMR042W 534 nt3.79□□□□□ -1.8
VPS38Q05919 HNT3YOR258W 654 nt3.79□□□□□ -1.8
VPS38Q05919 snR44snR44 211 nt3.79□□□□□ -1.8
VPS38Q05919 DAP2YHR028C 2457 nt3.79□□□□□ -1.8
VPS38Q05919 RIM4YHL024W 2142 nt3.79□□□□□ -1.8
VPS38Q05919 FAP7YDL166C 594 nt3.78□□□□□ -1.8
VPS38Q05919 UBC12YLR306W 567 nt3.78□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 30.4 ms