Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.02■□□□□ 0.8
SMSP52788 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.02■□□□□ 0.8
SMSP52788 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.02■□□□□ 0.8
SMSP52788 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMSP52788 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.02■□□□□ 0.8
SMSP52788 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMSP52788 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMSP52788 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SMSP52788 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SMSP52788 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SMSP52788 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SMSP52788 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
SMSP52788 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SMSP52788 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SMSP52788 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMSP52788 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SMSP52788 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
SMSP52788 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SMSP52788 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMSP52788 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMSP52788 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMSP52788 KRT18P5-201ENST00000436075 1291 ntBASIC20.01■□□□□ 0.79
SMSP52788 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.01■□□□□ 0.79
SMSP52788 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SMSP52788 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.01■□□□□ 0.79
SMSP52788 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMSP52788 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMSP52788 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SMSP52788 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMSP52788 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SMSP52788 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SMSP52788 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMSP52788 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
SMSP52788 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMSP52788 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20■□□□□ 0.79
SMSP52788 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMSP52788 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SMSP52788 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20■□□□□ 0.79
SMSP52788 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20■□□□□ 0.79
SMSP52788 AC123595.1-201ENST00000440769 1046 ntBASIC20■□□□□ 0.79
SMSP52788 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMSP52788 IKBKGP1-201ENST00000612193 1073 ntBASIC20■□□□□ 0.79
SMSP52788 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SMSP52788 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMSP52788 AL137060.1-201ENST00000618151 2648 ntBASIC20■□□□□ 0.79
SMSP52788 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMSP52788 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SMSP52788 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.99■□□□□ 0.79
SMSP52788 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.99■□□□□ 0.79
SMSP52788 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.99■□□□□ 0.79
SMSP52788 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.99■□□□□ 0.79
SMSP52788 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.99■□□□□ 0.79
SMSP52788 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.99■□□□□ 0.79
SMSP52788 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.99■□□□□ 0.79
SMSP52788 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMSP52788 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SMSP52788 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMSP52788 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMSP52788 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SMSP52788 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMSP52788 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.98■□□□□ 0.79
SMSP52788 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.98■□□□□ 0.79
SMSP52788 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMSP52788 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.98■□□□□ 0.79
SMSP52788 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMSP52788 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.98■□□□□ 0.79
SMSP52788 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.97■□□□□ 0.79
SMSP52788 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.97■□□□□ 0.79
SMSP52788 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SMSP52788 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SMSP52788 LINC01529-204ENST00000636474 1715 ntBASIC19.97■□□□□ 0.79
SMSP52788 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.97■□□□□ 0.79
SMSP52788 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.97■□□□□ 0.79
SMSP52788 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMSP52788 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SMSP52788 AC027612.3-201ENST00000413684 1047 ntBASIC19.97■□□□□ 0.79
SMSP52788 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.97■□□□□ 0.79
SMSP52788 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SMSP52788 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.97■□□□□ 0.79
SMSP52788 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMSP52788 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMSP52788 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMSP52788 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms