Protein–RNA interactions for Protein: P52286

SKP1, Suppressor of kinetochore protein 1, yeast

Predictions only

Length 194 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	P52286	CDC48	YDL126C	2508 nt		5.2	□□□□□ -1.58
SKP1	P52286	AMA1	YGR225W	1782 nt		5.2	□□□□□ -1.58
SKP1	P52286	FRS2	YFL022C	1512 nt		5.2	□□□□□ -1.58
SKP1	P52286	YDL071C	YDL071C	375 nt		5.2	□□□□□ -1.58
SKP1	P52286	YEL068C	YEL068C	333 nt		5.2	□□□□□ -1.58
SKP1	P52286	YER175W-A	YER175W-A	165 nt		5.2	□□□□□ -1.58
SKP1	P52286	YGL015C	YGL015C	393 nt		5.2	□□□□□ -1.58
SKP1	P52286	SOL4	YGR248W	768 nt		5.2	□□□□□ -1.58
SKP1	P52286	MAM33	YIL070C	801 nt		5.2	□□□□□ -1.58
SKP1	P52286	ATP14	YLR295C	375 nt		5.2	□□□□□ -1.58
SKP1	P52286	CTK3	YML112W	891 nt		5.2	□□□□□ -1.58
SKP1	P52286	SKO1	YNL167C	1944 nt		5.2	□□□□□ -1.58
SKP1	P52286	DBF2	YGR092W	1719 nt		5.2	□□□□□ -1.58
SKP1	P52286	SOF1	YLL011W	1470 nt		5.2	□□□□□ -1.58
SKP1	P52286	CLB2	YPR119W	1476 nt		5.2	□□□□□ -1.58
SKP1	P52286	OSW2	YLR054C	2175 nt		5.19	□□□□□ -1.58
SKP1	P52286	RVB1	YDR190C	1392 nt		5.19	□□□□□ -1.58
SKP1	P52286	YET3	YDL072C	612 nt		5.19	□□□□□ -1.58
SKP1	P52286	YGR121W-A	YGR121W-A	216 nt		5.19	□□□□□ -1.58
SKP1	P52286	PEX4	YGR133W	552 nt		5.19	□□□□□ -1.58
SKP1	P52286	RPE1	YJL121C	717 nt		5.19	□□□□□ -1.58
SKP1	P52286	YKL118W	YKL118W	312 nt		5.19	□□□□□ -1.58
SKP1	P52286	CDC42	YLR229C	576 nt		5.19	□□□□□ -1.58
SKP1	P52286	HAP3	YBL021C	435 nt		5.19	□□□□□ -1.58
SKP1	P52286	YMR315W	YMR315W	1050 nt		5.19	□□□□□ -1.58
SKP1	P52286	SOL1	YNR034W	966 nt		5.19	□□□□□ -1.58
SKP1	P52286	MRPL51	YPR100W	423 nt		5.19	□□□□□ -1.58
SKP1	P52286	snR54	snR54	86 nt		5.19	□□□□□ -1.58
SKP1	P52286	YVC1	YOR087W	2028 nt		5.19	□□□□□ -1.58
SKP1	P52286	AGA1	YNR044W	2178 nt		5.19	□□□□□ -1.58
SKP1	P52286	YRB30	YGL164C	1323 nt		5.19	□□□□□ -1.58
SKP1	P52286	ZPR1	YGR211W	1461 nt		5.19	□□□□□ -1.58
SKP1	P52286	YIR007W	YIR007W	2295 nt		5.18	□□□□□ -1.58
SKP1	P52286	MKK2	YPL140C	1521 nt		5.18	□□□□□ -1.58
SKP1	P52286	GAS3	YMR215W	1575 nt		5.18	□□□□□ -1.58
SKP1	P52286	MAK31	YCR020C-A	267 nt		5.18	□□□□□ -1.58
SKP1	P52286	TFB3	YDR460W	966 nt		5.18	□□□□□ -1.58
SKP1	P52286	YIL171W-A	YIL171W-A	453 nt		5.18	□□□□□ -1.58
SKP1	P52286	YJL220W	YJL220W	453 nt		5.18	□□□□□ -1.58
SKP1	P52286	TDH2	YJR009C	999 nt		5.18	□□□□□ -1.58
SKP1	P52286	YML012C-A	YML012C-A	378 nt		5.18	□□□□□ -1.58
SKP1	P52286	YMR141C	YMR141C	309 nt		5.18	□□□□□ -1.58
SKP1	P52286	YMR252C	YMR252C	405 nt		5.18	□□□□□ -1.58
SKP1	P52286	POP3	YNL282W	588 nt		5.18	□□□□□ -1.58
SKP1	P52286	RPL18B	YNL301C	561 nt		5.18	□□□□□ -1.58
SKP1	P52286	SCS22	YBL091C-A	528 nt		5.18	□□□□□ -1.58
SKP1	P52286	YPR114W	YPR114W	948 nt		5.18	□□□□□ -1.58
SKP1	P52286	SUS1	YBR111W-A	291 nt		5.18	□□□□□ -1.58
SKP1	P52286	MTL1	YGR023W	1656 nt		5.18	□□□□□ -1.58
SKP1	P52286	ALD6	YPL061W	1503 nt		5.18	□□□□□ -1.58
SKP1	P52286	YDR154C	YDR154C	351 nt		5.17	□□□□□ -1.58
SKP1	P52286	SCS2	YER120W	735 nt		5.17	□□□□□ -1.58
SKP1	P52286	FAR7	YFR008W	666 nt		5.17	□□□□□ -1.58
SKP1	P52286	YJR012C	YJR012C	624 nt		5.17	□□□□□ -1.58
SKP1	P52286	CGI121	YML036W	546 nt		5.17	□□□□□ -1.58
SKP1	P52286	YMR087W	YMR087W	855 nt		5.17	□□□□□ -1.58
SKP1	P52286	POF1	YCL047C	777 nt		5.17	□□□□□ -1.58
SKP1	P52286	SPB4	YFL002C	1821 nt		5.17	□□□□□ -1.58
SKP1	P52286	VTH1	YIL173W	4650 nt		5.17	□□□□□ -1.58
SKP1	P52286	VTH2	YJL222W	4650 nt		5.17	□□□□□ -1.58
SKP1	P52286	VPS33	YLR396C	2076 nt		5.17	□□□□□ -1.58
SKP1	P52286	RRB1	YMR131C	1536 nt		5.17	□□□□□ -1.58
SKP1	P52286	ALG6	YOR002W	1635 nt		5.16	□□□□□ -1.58
SKP1	P52286	MSL5	YLR116W	1431 nt		5.16	□□□□□ -1.58
SKP1	P52286	ACC1	YNR016C	6702 nt		5.16	□□□□□ -1.58
SKP1	P52286	RPL7A	YGL076C	735 nt		5.16	□□□□□ -1.58
SKP1	P52286	YGR017W	YGR017W	894 nt		5.16	□□□□□ -1.58
SKP1	P52286	CAB4	YGR277C	918 nt		5.16	□□□□□ -1.58
SKP1	P52286	tR(ACG)D	tR(ACG)D	73 nt		5.16	□□□□□ -1.58
SKP1	P52286	tR(ACG)E	tR(ACG)E	73 nt		5.16	□□□□□ -1.58
SKP1	P52286	tR(ACG)K	tR(ACG)K	73 nt		5.16	□□□□□ -1.58
SKP1	P52286	tR(ACG)L	tR(ACG)L	73 nt		5.16	□□□□□ -1.58
SKP1	P52286	tR(ACG)O	tR(ACG)O	73 nt		5.16	□□□□□ -1.58
SKP1	P52286	PHO86	YJL117W	936 nt		5.16	□□□□□ -1.58
SKP1	P52286	PGU1	YJR153W	1086 nt		5.16	□□□□□ -1.58
SKP1	P52286	YLL044W	YLL044W	447 nt		5.16	□□□□□ -1.58
SKP1	P52286	RPL7B	YPL198W	735 nt		5.16	□□□□□ -1.58
SKP1	P52286	AIM4	YBR194W	372 nt		5.16	□□□□□ -1.58
SKP1	P52286	YPR148C	YPR148C	1308 nt		5.16	□□□□□ -1.58
SKP1	P52286	BIK1	YCL029C	1323 nt		5.16	□□□□□ -1.58
SKP1	P52286	SSL1	YLR005W	1386 nt		5.16	□□□□□ -1.58
SKP1	P52286	YOR365C	YOR365C	2112 nt		5.15	□□□□□ -1.58
SKP1	P52286	PPR1	YLR014C	2715 nt		5.15	□□□□□ -1.58
SKP1	P52286	YDR015C	YDR015C	240 nt		5.15	□□□□□ -1.59
SKP1	P52286	YDR149C	YDR149C	708 nt		5.15	□□□□□ -1.59
SKP1	P52286	YGR035W-A	YGR035W-A	222 nt		5.15	□□□□□ -1.59
SKP1	P52286	YHR218W-A	YHR218W-A	318 nt		5.15	□□□□□ -1.59
SKP1	P52286	LDB18	YLL049W	540 nt		5.15	□□□□□ -1.59
SKP1	P52286	RNH203	YLR154C	333 nt		5.15	□□□□□ -1.59
SKP1	P52286	ARV1	YLR242C	966 nt		5.15	□□□□□ -1.59
SKP1	P52286	YML009C-A	YML009C-A	327 nt		5.15	□□□□□ -1.59
SKP1	P52286	YML031C-A	YML031C-A	336 nt		5.15	□□□□□ -1.59
SKP1	P52286	YBL112C	YBL112C	318 nt		5.15	□□□□□ -1.59
SKP1	P52286	HOM3	YER052C	1584 nt		5.15	□□□□□ -1.59
SKP1	P52286	SEN54	YPL083C	1404 nt		5.14	□□□□□ -1.59
SKP1	P52286	RTC5	YOR118W	1704 nt		5.14	□□□□□ -1.59
SKP1	P52286	MCM3	YEL032W	2916 nt		5.14	□□□□□ -1.59
SKP1	P52286	PAL1	YDR348C	1500 nt		5.14	□□□□□ -1.59
SKP1	P52286	IMD2	YHR216W	1572 nt		5.14	□□□□□ -1.59
SKP1	P52286	ANR2	YKL047W	1551 nt		5.14	□□□□□ -1.59

Retrieved 100 of 7,029 protein–RNA pairs in 146.1 ms