Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB28P51157 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB28P51157 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB28P51157 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB28P51157 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RAB28P51157 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB28P51157 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RAB28P51157 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB28P51157 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB28P51157 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB28P51157 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RAB28P51157 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.78■□□□□ 0.92
RAB28P51157 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB28P51157 CCDC92B-201ENST00000575506 885 ntBASIC20.78■□□□□ 0.92
RAB28P51157 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB28P51157 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB28P51157 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB28P51157 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB28P51157 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB28P51157 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB28P51157 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB28P51157 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB28P51157 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB28P51157 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB28P51157 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.77■□□□□ 0.92
RAB28P51157 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB28P51157 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB28P51157 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RAB28P51157 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB28P51157 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB28P51157 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
RAB28P51157 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RAB28P51157 KRT18P14-201ENST00000534205 1250 ntBASIC20.76■□□□□ 0.91
RAB28P51157 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB28P51157 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB28P51157 MIR5787-201ENST00000611784 55 ntBASIC20.76■□□□□ 0.91
RAB28P51157 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB28P51157 AP006587.3-201ENST00000525742 1516 ntBASIC20.76■□□□□ 0.91
RAB28P51157 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB28P51157 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RAB28P51157 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB28P51157 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB28P51157 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB28P51157 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB28P51157 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB28P51157 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB28P51157 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RAB28P51157 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RAB28P51157 AC055733.4-201ENST00000638462 1354 ntBASIC20.75■□□□□ 0.91
RAB28P51157 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB28P51157 AC034268.1-201ENST00000441047 882 ntBASIC20.75■□□□□ 0.91
RAB28P51157 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RAB28P51157 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB28P51157 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB28P51157 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB28P51157 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB28P51157 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB28P51157 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
RAB28P51157 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB28P51157 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB28P51157 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.74■□□□□ 0.91
RAB28P51157 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB28P51157 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB28P51157 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB28P51157 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB28P51157 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB28P51157 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB28P51157 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB28P51157 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RAB28P51157 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB28P51157 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB28P51157 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB28P51157 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB28P51157 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.73■□□□□ 0.91
RAB28P51157 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB28P51157 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.73■□□□□ 0.91
RAB28P51157 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB28P51157 DUX4L2-201ENST00000561772 1275 ntBASIC20.73■□□□□ 0.91
RAB28P51157 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB28P51157 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
RAB28P51157 DUX4L6-201ENST00000626483 1275 ntBASIC20.73■□□□□ 0.91
RAB28P51157 DUX4L1-201ENST00000627662 1275 ntBASIC20.73■□□□□ 0.91
RAB28P51157 DUX4L8-201ENST00000629013 1275 ntBASIC20.73■□□□□ 0.91
RAB28P51157 DUX4L3-201ENST00000630187 1275 ntBASIC20.73■□□□□ 0.91
RAB28P51157 DUX4L7-201ENST00000630678 1275 ntBASIC20.73■□□□□ 0.91
RAB28P51157 DUX4L5-201ENST00000630834 1275 ntBASIC20.73■□□□□ 0.91
RAB28P51157 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB28P51157 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB28P51157 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.73■□□□□ 0.91
RAB28P51157 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
RAB28P51157 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB28P51157 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB28P51157 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB28P51157 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RAB28P51157 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB28P51157 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB28P51157 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RAB28P51157 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RAB28P51157 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB28P51157 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms