Protein–RNA interactions for Protein: P50479

PDLIM4, PDZ and LIM domain protein 4, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4P50479 AL117328.2-201ENST00000624617 1940 ntBASIC18.19■□□□□ 0.5
PDLIM4P50479 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM4P50479 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.19■□□□□ 0.5
PDLIM4P50479 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM4P50479 ANOS2P-203ENST00000472227 1816 ntBASIC18.19■□□□□ 0.5
PDLIM4P50479 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.19■□□□□ 0.5
PDLIM4P50479 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDLIM4P50479 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM4P50479 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.19■□□□□ 0.5
PDLIM4P50479 HLA-L-209ENST00000420110 1011 ntBASIC18.19■□□□□ 0.5
PDLIM4P50479 CDCA4P2-201ENST00000441182 718 ntBASIC18.19■□□□□ 0.5
PDLIM4P50479 AC026185.1-201ENST00000445748 174 ntBASIC18.19■□□□□ 0.5
PDLIM4P50479 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.19■□□□□ 0.5
PDLIM4P50479 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PDLIM4P50479 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM4P50479 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.19■□□□□ 0.5
PDLIM4P50479 AC005224.4-201ENST00000583262 1652 ntBASIC18.18■□□□□ 0.5
PDLIM4P50479 ESRRAP2-201ENST00000418437 1549 ntBASIC18.18■□□□□ 0.5
PDLIM4P50479 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM4P50479 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PDLIM4P50479 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM4P50479 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PDLIM4P50479 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM4P50479 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM4P50479 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM4P50479 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PDLIM4P50479 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM4P50479 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.18■□□□□ 0.5
PDLIM4P50479 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PDLIM4P50479 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM4P50479 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.18■□□□□ 0.5
PDLIM4P50479 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.18■□□□□ 0.5
PDLIM4P50479 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM4P50479 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.18■□□□□ 0.5
PDLIM4P50479 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM4P50479 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.18■□□□□ 0.5
PDLIM4P50479 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM4P50479 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PDLIM4P50479 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.17■□□□□ 0.5
PDLIM4P50479 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM4P50479 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM4P50479 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.17■□□□□ 0.5
PDLIM4P50479 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.17■□□□□ 0.5
PDLIM4P50479 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.17■□□□□ 0.5
PDLIM4P50479 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.17■□□□□ 0.5
PDLIM4P50479 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PDLIM4P50479 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM4P50479 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM4P50479 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM4P50479 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.17■□□□□ 0.5
PDLIM4P50479 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM4P50479 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM4P50479 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM4P50479 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.16■□□□□ 0.5
PDLIM4P50479 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM4P50479 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM4P50479 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM4P50479 KRT87P-202ENST00000534226 1464 ntBASIC18.16■□□□□ 0.5
PDLIM4P50479 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM4P50479 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM4P50479 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PDLIM4P50479 AC092068.2-201ENST00000590491 1708 ntBASIC18.16■□□□□ 0.5
PDLIM4P50479 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM4P50479 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.16■□□□□ 0.5
PDLIM4P50479 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PDLIM4P50479 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.16■□□□□ 0.5
PDLIM4P50479 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PDLIM4P50479 AC006970.2-201ENST00000450065 779 ntBASIC18.16■□□□□ 0.5
PDLIM4P50479 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.16■□□□□ 0.5
PDLIM4P50479 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.16■□□□□ 0.5
PDLIM4P50479 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.16■□□□□ 0.5
PDLIM4P50479 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM4P50479 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.16■□□□□ 0.5
PDLIM4P50479 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM4P50479 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
PDLIM4P50479 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM4P50479 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PDLIM4P50479 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.16■□□□□ 0.5
PDLIM4P50479 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM4P50479 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.16■□□□□ 0.5
PDLIM4P50479 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM4P50479 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PDLIM4P50479 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PDLIM4P50479 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM4P50479 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM4P50479 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM4P50479 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.15■□□□□ 0.5
PDLIM4P50479 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.15■□□□□ 0.5
PDLIM4P50479 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM4P50479 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM4P50479 RAP2CP1-201ENST00000605103 478 ntBASIC18.15■□□□□ 0.5
PDLIM4P50479 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.15■□□□□ 0.5
PDLIM4P50479 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.15■□□□□ 0.5
PDLIM4P50479 AC011767.1-201ENST00000617410 1153 ntBASIC18.15■□□□□ 0.5
PDLIM4P50479 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM4P50479 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM4P50479 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM4P50479 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.14■□□□□ 0.5
PDLIM4P50479 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PDLIM4P50479 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms