Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CX3CR1P49238 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CX3CR1P49238 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.84■□□□□ 0.61
CX3CR1P49238 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CX3CR1P49238 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.84■□□□□ 0.61
CX3CR1P49238 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CX3CR1P49238 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.84■□□□□ 0.61
CX3CR1P49238 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CX3CR1P49238 AC010141.3-201ENST00000456659 717 ntBASIC18.84■□□□□ 0.61
CX3CR1P49238 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.84■□□□□ 0.61
CX3CR1P49238 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.84■□□□□ 0.61
CX3CR1P49238 AC136469.2-201ENST00000623944 1028 ntBASIC18.84■□□□□ 0.61
CX3CR1P49238 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.84■□□□□ 0.61
CX3CR1P49238 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CX3CR1P49238 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.84■□□□□ 0.61
CX3CR1P49238 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CX3CR1P49238 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.83■□□□□ 0.61
CX3CR1P49238 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.83■□□□□ 0.61
CX3CR1P49238 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CX3CR1P49238 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.83■□□□□ 0.61
CX3CR1P49238 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CX3CR1P49238 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CX3CR1P49238 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CX3CR1P49238 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CX3CR1P49238 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CX3CR1P49238 AL136116.3-201ENST00000402907 1138 ntBASIC18.83■□□□□ 0.6
CX3CR1P49238 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CX3CR1P49238 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.83■□□□□ 0.6
CX3CR1P49238 AC011298.3-201ENST00000615796 283 ntBASIC18.83■□□□□ 0.6
CX3CR1P49238 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.83■□□□□ 0.6
CX3CR1P49238 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CX3CR1P49238 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CX3CR1P49238 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CX3CR1P49238 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CX3CR1P49238 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CX3CR1P49238 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.82■□□□□ 0.6
CX3CR1P49238 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CX3CR1P49238 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.82■□□□□ 0.6
CX3CR1P49238 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CX3CR1P49238 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CX3CR1P49238 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CX3CR1P49238 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CX3CR1P49238 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CX3CR1P49238 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CX3CR1P49238 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CX3CR1P49238 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CX3CR1P49238 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CX3CR1P49238 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CX3CR1P49238 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CX3CR1P49238 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.81■□□□□ 0.6
CX3CR1P49238 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CX3CR1P49238 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CX3CR1P49238 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CX3CR1P49238 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CX3CR1P49238 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CX3CR1P49238 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CX3CR1P49238 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.81■□□□□ 0.6
CX3CR1P49238 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CX3CR1P49238 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CX3CR1P49238 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CX3CR1P49238 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CX3CR1P49238 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CX3CR1P49238 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CX3CR1P49238 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CX3CR1P49238 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.8■□□□□ 0.6
CX3CR1P49238 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CX3CR1P49238 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CX3CR1P49238 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CX3CR1P49238 SLC47A1P1-202ENST00000449666 945 ntBASIC18.8■□□□□ 0.6
CX3CR1P49238 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.8■□□□□ 0.6
CX3CR1P49238 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CX3CR1P49238 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CX3CR1P49238 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.8■□□□□ 0.6
CX3CR1P49238 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CX3CR1P49238 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.79■□□□□ 0.6
CX3CR1P49238 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.79■□□□□ 0.6
CX3CR1P49238 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CX3CR1P49238 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CX3CR1P49238 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CX3CR1P49238 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CX3CR1P49238 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.79■□□□□ 0.6
CX3CR1P49238 AC131212.1-201ENST00000613771 668 ntBASIC18.79■□□□□ 0.6
CX3CR1P49238 OXCT2P1-201ENST00000447263 1535 ntBASIC18.79■□□□□ 0.6
CX3CR1P49238 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.79■□□□□ 0.6
CX3CR1P49238 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.79■□□□□ 0.6
CX3CR1P49238 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CX3CR1P49238 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CX3CR1P49238 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CX3CR1P49238 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.78■□□□□ 0.6
CX3CR1P49238 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CX3CR1P49238 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CX3CR1P49238 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CX3CR1P49238 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.78■□□□□ 0.6
CX3CR1P49238 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.78■□□□□ 0.6
CX3CR1P49238 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.78■□□□□ 0.6
CX3CR1P49238 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CX3CR1P49238 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CX3CR1P49238 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CX3CR1P49238 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CX3CR1P49238 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms