Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SLC1A3P43003 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
SLC1A3P43003 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SLC1A3P43003 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A3P43003 OXCT2P1-201ENST00000447263 1535 ntBASIC19.71■□□□□ 0.75
SLC1A3P43003 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC1A3P43003 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A3P43003 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A3P43003 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC1A3P43003 PBX2P1-201ENST00000493219 1291 ntBASIC19.71■□□□□ 0.75
SLC1A3P43003 AC233992.3-201ENST00000607491 485 ntBASIC19.71■□□□□ 0.75
SLC1A3P43003 AC106739.1-201ENST00000617035 715 ntBASIC19.71■□□□□ 0.75
SLC1A3P43003 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SLC1A3P43003 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC1A3P43003 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A3P43003 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SLC1A3P43003 AC026310.3-201ENST00000625186 2373 ntBASIC19.71■□□□□ 0.75
SLC1A3P43003 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC1A3P43003 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC1A3P43003 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC1A3P43003 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC1A3P43003 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC1A3P43003 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC1A3P43003 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC1A3P43003 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC1A3P43003 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC1A3P43003 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SLC1A3P43003 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SLC1A3P43003 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC1A3P43003 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC1A3P43003 OR7E47P-201ENST00000546390 1422 ntBASIC19.69■□□□□ 0.74
SLC1A3P43003 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A3P43003 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC1A3P43003 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC1A3P43003 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SLC1A3P43003 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC1A3P43003 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A3P43003 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC1A3P43003 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A3P43003 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A3P43003 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A3P43003 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A3P43003 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A3P43003 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A3P43003 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC1A3P43003 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A3P43003 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A3P43003 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SLC1A3P43003 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.68■□□□□ 0.74
SLC1A3P43003 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A3P43003 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SLC1A3P43003 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A3P43003 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A3P43003 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SLC1A3P43003 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A3P43003 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A3P43003 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A3P43003 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC1A3P43003 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A3P43003 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC1A3P43003 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A3P43003 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A3P43003 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A3P43003 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
SLC1A3P43003 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A3P43003 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC1A3P43003 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC1A3P43003 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A3P43003 AC110285.6-201ENST00000617652 491 ntBASIC19.67■□□□□ 0.74
SLC1A3P43003 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.67■□□□□ 0.74
SLC1A3P43003 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A3P43003 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A3P43003 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A3P43003 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC1A3P43003 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SLC1A3P43003 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A3P43003 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC1A3P43003 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A3P43003 FAM99A-202ENST00000538190 1989 ntBASIC19.66■□□□□ 0.74
SLC1A3P43003 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC1A3P43003 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A3P43003 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC1A3P43003 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A3P43003 EDA-201ENST00000338901 1233 ntBASIC19.66■□□□□ 0.74
SLC1A3P43003 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC1A3P43003 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A3P43003 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC1A3P43003 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.66■□□□□ 0.74
SLC1A3P43003 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A3P43003 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC1A3P43003 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A3P43003 AC010542.4-201ENST00000563151 1910 ntBASIC19.66■□□□□ 0.74
SLC1A3P43003 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A3P43003 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SLC1A3P43003 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A3P43003 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC1A3P43003 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC1A3P43003 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC1A3P43003 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC1A3P43003 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms