Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 pRNA.6-201ENST00000610482 90 ntBASIC19.3■□□□□ 0.68
APEX1P27695 pRNA.5-201ENST00000612139 90 ntBASIC19.3■□□□□ 0.68
APEX1P27695 pRNA.11-201ENST00000618423 90 ntBASIC19.3■□□□□ 0.68
APEX1P27695 pRNA.13-201ENST00000619112 90 ntBASIC19.3■□□□□ 0.68
APEX1P27695 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
APEX1P27695 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
APEX1P27695 AC087742.1-201ENST00000575880 1738 ntBASIC19.3■□□□□ 0.68
APEX1P27695 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
APEX1P27695 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
APEX1P27695 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
APEX1P27695 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
APEX1P27695 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APEX1P27695 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APEX1P27695 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
APEX1P27695 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APEX1P27695 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APEX1P27695 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APEX1P27695 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
APEX1P27695 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.29■□□□□ 0.68
APEX1P27695 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.29■□□□□ 0.68
APEX1P27695 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.29■□□□□ 0.68
APEX1P27695 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.29■□□□□ 0.68
APEX1P27695 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
APEX1P27695 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APEX1P27695 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.28■□□□□ 0.68
APEX1P27695 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APEX1P27695 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APEX1P27695 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APEX1P27695 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
APEX1P27695 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APEX1P27695 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.28■□□□□ 0.68
APEX1P27695 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
APEX1P27695 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.28■□□□□ 0.68
APEX1P27695 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.28■□□□□ 0.68
APEX1P27695 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
APEX1P27695 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APEX1P27695 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APEX1P27695 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.28■□□□□ 0.68
APEX1P27695 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.28■□□□□ 0.68
APEX1P27695 MIR3181-201ENST00000578512 73 ntBASIC19.28■□□□□ 0.68
APEX1P27695 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
APEX1P27695 AC004687.1-201ENST00000579003 1625 ntBASIC19.28■□□□□ 0.68
APEX1P27695 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APEX1P27695 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.28■□□□□ 0.68
APEX1P27695 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
APEX1P27695 SYT6-210ENST00000641643 1587 ntBASIC19.27■□□□□ 0.68
APEX1P27695 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
APEX1P27695 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
APEX1P27695 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.27■□□□□ 0.68
APEX1P27695 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
APEX1P27695 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APEX1P27695 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
APEX1P27695 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APEX1P27695 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APEX1P27695 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APEX1P27695 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APEX1P27695 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.27■□□□□ 0.68
APEX1P27695 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APEX1P27695 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.27■□□□□ 0.68
APEX1P27695 AL499627.2-201ENST00000606283 725 ntBASIC19.27■□□□□ 0.68
APEX1P27695 AC005837.3-201ENST00000612163 286 ntBASIC19.27■□□□□ 0.68
APEX1P27695 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
APEX1P27695 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APEX1P27695 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APEX1P27695 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APEX1P27695 AC010542.4-201ENST00000563151 1910 ntBASIC19.27■□□□□ 0.67
APEX1P27695 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APEX1P27695 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
APEX1P27695 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
APEX1P27695 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.26■□□□□ 0.67
APEX1P27695 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APEX1P27695 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.26■□□□□ 0.67
APEX1P27695 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APEX1P27695 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
APEX1P27695 DUX4L19-201ENST00000557448 1267 ntBASIC19.26■□□□□ 0.67
APEX1P27695 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.26■□□□□ 0.67
APEX1P27695 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.26■□□□□ 0.67
APEX1P27695 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
APEX1P27695 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APEX1P27695 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.26■□□□□ 0.67
APEX1P27695 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APEX1P27695 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APEX1P27695 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APEX1P27695 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APEX1P27695 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APEX1P27695 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
APEX1P27695 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APEX1P27695 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APEX1P27695 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
APEX1P27695 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.25■□□□□ 0.67
APEX1P27695 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APEX1P27695 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APEX1P27695 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APEX1P27695 SERBP1P1-201ENST00000396021 1160 ntBASIC19.25■□□□□ 0.67
APEX1P27695 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APEX1P27695 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APEX1P27695 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
APEX1P27695 AC133637.1-201ENST00000624115 1537 ntBASIC19.25■□□□□ 0.67
APEX1P27695 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
APEX1P27695 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms