Protein–RNA interactions for Protein: P23368

ME2, NAD-dependent malic enzyme, mitochondrial, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ME2P23368 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.65■□□□□ 0.9
ME2P23368 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ME2P23368 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ME2P23368 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ME2P23368 CA15P2-201ENST00000611168 834 ntBASIC20.65■□□□□ 0.9
ME2P23368 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ME2P23368 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ME2P23368 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ME2P23368 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.65■□□□□ 0.9
ME2P23368 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ME2P23368 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ME2P23368 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ME2P23368 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.64■□□□□ 0.89
ME2P23368 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ME2P23368 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ME2P23368 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ME2P23368 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ME2P23368 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.64■□□□□ 0.89
ME2P23368 MIR6724-1-201ENST00000616420 92 ntBASIC20.64■□□□□ 0.89
ME2P23368 MIR6724-2-201ENST00000616483 92 ntBASIC20.64■□□□□ 0.89
ME2P23368 MIR6724-4-201ENST00000617390 92 ntBASIC20.64■□□□□ 0.89
ME2P23368 MIR6724-3-201ENST00000622482 92 ntBASIC20.64■□□□□ 0.89
ME2P23368 AC009086.3-201ENST00000623486 1008 ntBASIC20.64■□□□□ 0.89
ME2P23368 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ME2P23368 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ME2P23368 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ME2P23368 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
ME2P23368 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ME2P23368 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ME2P23368 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ME2P23368 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ME2P23368 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ME2P23368 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ME2P23368 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ME2P23368 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
ME2P23368 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ME2P23368 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ME2P23368 AC005703.6-201ENST00000623265 1329 ntBASIC20.63■□□□□ 0.89
ME2P23368 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ME2P23368 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.63■□□□□ 0.89
ME2P23368 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.63■□□□□ 0.89
ME2P23368 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ME2P23368 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.63■□□□□ 0.89
ME2P23368 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.63■□□□□ 0.89
ME2P23368 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ME2P23368 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ME2P23368 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ME2P23368 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ME2P23368 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ME2P23368 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.62■□□□□ 0.89
ME2P23368 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.62■□□□□ 0.89
ME2P23368 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ME2P23368 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ME2P23368 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ME2P23368 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ME2P23368 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ME2P23368 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ME2P23368 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ME2P23368 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.62■□□□□ 0.89
ME2P23368 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ME2P23368 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.62■□□□□ 0.89
ME2P23368 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ME2P23368 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ME2P23368 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ME2P23368 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ME2P23368 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ME2P23368 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ME2P23368 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ME2P23368 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ME2P23368 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ME2P23368 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.61■□□□□ 0.89
ME2P23368 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
ME2P23368 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.61■□□□□ 0.89
ME2P23368 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ME2P23368 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ME2P23368 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ME2P23368 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.6■□□□□ 0.89
ME2P23368 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ME2P23368 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ME2P23368 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.6■□□□□ 0.89
ME2P23368 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.6■□□□□ 0.89
ME2P23368 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.6■□□□□ 0.89
ME2P23368 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ME2P23368 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ME2P23368 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ME2P23368 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ME2P23368 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ME2P23368 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
ME2P23368 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ME2P23368 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.59■□□□□ 0.89
ME2P23368 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.59■□□□□ 0.89
ME2P23368 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ME2P23368 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ME2P23368 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ME2P23368 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
ME2P23368 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ME2P23368 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
ME2P23368 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ME2P23368 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ME2P23368 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms