Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RAB40ALP0C0E4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RAB40ALP0C0E4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB40ALP0C0E4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.26■□□□□ 0.83
RAB40ALP0C0E4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 AC011767.1-201ENST00000617410 1153 ntBASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40ALP0C0E4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB40ALP0C0E4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB40ALP0C0E4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB40ALP0C0E4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.24■□□□□ 0.83
RAB40ALP0C0E4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB40ALP0C0E4 HLA-L-209ENST00000420110 1011 ntBASIC20.24■□□□□ 0.83
RAB40ALP0C0E4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
RAB40ALP0C0E4 AC104187.1-201ENST00000607510 612 ntBASIC20.24■□□□□ 0.83
RAB40ALP0C0E4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAB40ALP0C0E4 AC055733.4-201ENST00000638462 1354 ntBASIC20.23■□□□□ 0.83
RAB40ALP0C0E4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB40ALP0C0E4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAB40ALP0C0E4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.23■□□□□ 0.83
RAB40ALP0C0E4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.23■□□□□ 0.83
RAB40ALP0C0E4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.23■□□□□ 0.83
RAB40ALP0C0E4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAB40ALP0C0E4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.23■□□□□ 0.83
RAB40ALP0C0E4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
RAB40ALP0C0E4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB40ALP0C0E4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RAB40ALP0C0E4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RAB40ALP0C0E4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB40ALP0C0E4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB40ALP0C0E4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.22■□□□□ 0.83
RAB40ALP0C0E4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.22■□□□□ 0.83
RAB40ALP0C0E4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB40ALP0C0E4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.22■□□□□ 0.83
RAB40ALP0C0E4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB40ALP0C0E4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB40ALP0C0E4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RAB40ALP0C0E4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB40ALP0C0E4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB40ALP0C0E4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB40ALP0C0E4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 AL034346.1-201ENST00000568244 1277 ntBASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.21■□□□□ 0.83
RAB40ALP0C0E4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB40ALP0C0E4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB40ALP0C0E4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB40ALP0C0E4 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.2■□□□□ 0.82
RAB40ALP0C0E4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.2■□□□□ 0.82
RAB40ALP0C0E4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.2■□□□□ 0.82
RAB40ALP0C0E4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB40ALP0C0E4 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.2■□□□□ 0.82
RAB40ALP0C0E4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB40ALP0C0E4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB40ALP0C0E4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RAB40ALP0C0E4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.2■□□□□ 0.82
RAB40ALP0C0E4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB40ALP0C0E4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RAB40ALP0C0E4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB40ALP0C0E4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.19■□□□□ 0.82
RAB40ALP0C0E4 OR7E47P-201ENST00000546390 1422 ntBASIC20.19■□□□□ 0.82
RAB40ALP0C0E4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB40ALP0C0E4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB40ALP0C0E4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
RAB40ALP0C0E4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB40ALP0C0E4 AC006970.2-201ENST00000450065 779 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms