Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGN1P05114 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGN1P05114 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGN1P05114 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGN1P05114 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HMGN1P05114 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.4■□□□□ 0.7
HMGN1P05114 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.4■□□□□ 0.7
HMGN1P05114 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
HMGN1P05114 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGN1P05114 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGN1P05114 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.4■□□□□ 0.7
HMGN1P05114 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.4■□□□□ 0.7
HMGN1P05114 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGN1P05114 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HMGN1P05114 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HMGN1P05114 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGN1P05114 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGN1P05114 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGN1P05114 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGN1P05114 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HMGN1P05114 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGN1P05114 TSPY9P-201ENST00000440215 945 ntBASIC19.39■□□□□ 0.69
HMGN1P05114 TSPY11P-201ENST00000442607 1045 ntBASIC19.39■□□□□ 0.69
HMGN1P05114 AC239859.2-201ENST00000444165 318 ntBASIC19.39■□□□□ 0.69
HMGN1P05114 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGN1P05114 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
HMGN1P05114 AC068587.7-201ENST00000641602 218 ntBASIC19.39■□□□□ 0.69
HMGN1P05114 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGN1P05114 AC133637.1-201ENST00000624115 1537 ntBASIC19.39■□□□□ 0.69
HMGN1P05114 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGN1P05114 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
HMGN1P05114 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.39■□□□□ 0.69
HMGN1P05114 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
HMGN1P05114 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGN1P05114 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMGN1P05114 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGN1P05114 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.38■□□□□ 0.69
HMGN1P05114 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGN1P05114 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGN1P05114 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.38■□□□□ 0.69
HMGN1P05114 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMGN1P05114 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMGN1P05114 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMGN1P05114 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.38■□□□□ 0.69
HMGN1P05114 RNF165-205ENST00000588679 2904 ntBASIC19.38■□□□□ 0.69
HMGN1P05114 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGN1P05114 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGN1P05114 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGN1P05114 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGN1P05114 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.37■□□□□ 0.69
HMGN1P05114 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGN1P05114 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HMGN1P05114 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
HMGN1P05114 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.37■□□□□ 0.69
HMGN1P05114 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGN1P05114 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGN1P05114 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGN1P05114 AL451085.2-201ENST00000605085 799 ntBASIC19.37■□□□□ 0.69
HMGN1P05114 MIR6724-1-201ENST00000616420 92 ntBASIC19.37■□□□□ 0.69
HMGN1P05114 MIR6724-2-201ENST00000616483 92 ntBASIC19.37■□□□□ 0.69
HMGN1P05114 MIR6724-4-201ENST00000617390 92 ntBASIC19.37■□□□□ 0.69
HMGN1P05114 MIR6724-3-201ENST00000622482 92 ntBASIC19.37■□□□□ 0.69
HMGN1P05114 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGN1P05114 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGN1P05114 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.37■□□□□ 0.69
HMGN1P05114 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGN1P05114 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.37■□□□□ 0.69
HMGN1P05114 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGN1P05114 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGN1P05114 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGN1P05114 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGN1P05114 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HMGN1P05114 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGN1P05114 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.36■□□□□ 0.69
HMGN1P05114 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HMGN1P05114 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HMGN1P05114 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
HMGN1P05114 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HMGN1P05114 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
HMGN1P05114 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGN1P05114 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.35■□□□□ 0.69
HMGN1P05114 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGN1P05114 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.35■□□□□ 0.69
HMGN1P05114 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.35■□□□□ 0.69
HMGN1P05114 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HMGN1P05114 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGN1P05114 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGN1P05114 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.35■□□□□ 0.69
HMGN1P05114 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGN1P05114 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGN1P05114 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGN1P05114 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HMGN1P05114 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGN1P05114 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGN1P05114 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HMGN1P05114 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGN1P05114 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HMGN1P05114 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HMGN1P05114 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGN1P05114 pRNA.6-201ENST00000610482 90 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms