Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
APPP05067 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
APPP05067 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
APPP05067 AC009237.3-201ENST00000393279 1427 ntBASIC25.71■■□□□ 1.71
APPP05067 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.71■■□□□ 1.71
APPP05067 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC25.71■■□□□ 1.71
APPP05067 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
APPP05067 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
APPP05067 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.71■■□□□ 1.71
APPP05067 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.71■■□□□ 1.71
APPP05067 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.71■■□□□ 1.71
APPP05067 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.71■■□□□ 1.71
APPP05067 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
APPP05067 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.71■■□□□ 1.71
APPP05067 TERF1P2-201ENST00000583350 1212 ntBASIC25.71■■□□□ 1.71
APPP05067 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.71■■□□□ 1.71
APPP05067 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
APPP05067 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.71■■□□□ 1.71
APPP05067 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
APPP05067 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.71■■□□□ 1.71
APPP05067 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
APPP05067 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.7■■□□□ 1.71
APPP05067 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
APPP05067 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.7■■□□□ 1.71
APPP05067 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
APPP05067 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
APPP05067 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
APPP05067 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
APPP05067 DUX4L2-201ENST00000561772 1275 ntBASIC25.7■■□□□ 1.7
APPP05067 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.7■■□□□ 1.7
APPP05067 DUX4L6-201ENST00000626483 1275 ntBASIC25.7■■□□□ 1.7
APPP05067 DUX4L1-201ENST00000627662 1275 ntBASIC25.7■■□□□ 1.7
APPP05067 DUX4L8-201ENST00000629013 1275 ntBASIC25.7■■□□□ 1.7
APPP05067 DUX4L3-201ENST00000630187 1275 ntBASIC25.7■■□□□ 1.7
APPP05067 DUX4L7-201ENST00000630678 1275 ntBASIC25.7■■□□□ 1.7
APPP05067 DUX4L5-201ENST00000630834 1275 ntBASIC25.7■■□□□ 1.7
APPP05067 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
APPP05067 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC25.7■■□□□ 1.7
APPP05067 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
APPP05067 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
APPP05067 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.7■■□□□ 1.7
APPP05067 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
APPP05067 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
APPP05067 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
APPP05067 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.69■■□□□ 1.7
APPP05067 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.69■■□□□ 1.7
APPP05067 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC25.69■■□□□ 1.7
APPP05067 AC005224.4-201ENST00000583262 1652 ntBASIC25.69■■□□□ 1.7
APPP05067 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
APPP05067 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
APPP05067 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
APPP05067 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
APPP05067 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
APPP05067 AL034346.1-201ENST00000568244 1277 ntBASIC25.69■■□□□ 1.7
APPP05067 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
APPP05067 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.69■■□□□ 1.7
APPP05067 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
APPP05067 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
APPP05067 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
APPP05067 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
APPP05067 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
APPP05067 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
APPP05067 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25.68■■□□□ 1.7
APPP05067 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.68■■□□□ 1.7
APPP05067 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
APPP05067 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
APPP05067 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
APPP05067 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
APPP05067 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
APPP05067 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
APPP05067 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
APPP05067 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.67■■□□□ 1.7
APPP05067 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.67■■□□□ 1.7
APPP05067 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
APPP05067 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
APPP05067 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
APPP05067 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
APPP05067 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
APPP05067 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
APPP05067 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.67■■□□□ 1.7
APPP05067 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC25.67■■□□□ 1.7
APPP05067 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.67■■□□□ 1.7
APPP05067 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.67■■□□□ 1.7
APPP05067 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
APPP05067 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
APPP05067 AC012676.1-201ENST00000574705 1949 ntBASIC25.67■■□□□ 1.7
APPP05067 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.66■■□□□ 1.7
APPP05067 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
APPP05067 AC242852.2-201ENST00000615738 1807 ntBASIC25.66■■□□□ 1.7
APPP05067 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
APPP05067 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.66■■□□□ 1.7
APPP05067 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.66■■□□□ 1.7
APPP05067 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
APPP05067 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.66■■□□□ 1.7
APPP05067 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.66■■□□□ 1.7
APPP05067 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
APPP05067 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
APPP05067 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
APPP05067 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.66■■□□□ 1.7
APPP05067 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms