Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.03■□□□□ 0.96
TNFP01375 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.03■□□□□ 0.96
TNFP01375 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFP01375 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFP01375 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
TNFP01375 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.02■□□□□ 0.96
TNFP01375 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFP01375 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TNFP01375 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.02■□□□□ 0.96
TNFP01375 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFP01375 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFP01375 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TNFP01375 AC026185.1-201ENST00000445748 174 ntBASIC21.02■□□□□ 0.96
TNFP01375 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TNFP01375 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.01■□□□□ 0.95
TNFP01375 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFP01375 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFP01375 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
TNFP01375 ID1-201ENST00000376105 1233 ntBASIC21.01■□□□□ 0.95
TNFP01375 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.01■□□□□ 0.95
TNFP01375 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.01■□□□□ 0.95
TNFP01375 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.01■□□□□ 0.95
TNFP01375 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TNFP01375 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.01■□□□□ 0.95
TNFP01375 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFP01375 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFP01375 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.01■□□□□ 0.95
TNFP01375 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFP01375 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TNFP01375 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFP01375 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFP01375 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFP01375 AP006587.3-201ENST00000525742 1516 ntBASIC21■□□□□ 0.95
TNFP01375 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFP01375 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFP01375 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFP01375 AC139530.1-201ENST00000575312 1977 ntBASIC21■□□□□ 0.95
TNFP01375 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21■□□□□ 0.95
TNFP01375 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21■□□□□ 0.95
TNFP01375 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFP01375 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21■□□□□ 0.95
TNFP01375 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TNFP01375 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21■□□□□ 0.95
TNFP01375 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21■□□□□ 0.95
TNFP01375 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFP01375 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TNFP01375 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.99■□□□□ 0.95
TNFP01375 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TNFP01375 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFP01375 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TNFP01375 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.99■□□□□ 0.95
TNFP01375 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.99■□□□□ 0.95
TNFP01375 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.99■□□□□ 0.95
TNFP01375 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.99■□□□□ 0.95
TNFP01375 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.99■□□□□ 0.95
TNFP01375 RAP2CP1-201ENST00000605103 478 ntBASIC20.99■□□□□ 0.95
TNFP01375 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.99■□□□□ 0.95
TNFP01375 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.99■□□□□ 0.95
TNFP01375 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFP01375 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFP01375 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFP01375 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.98■□□□□ 0.95
TNFP01375 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TNFP01375 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.98■□□□□ 0.95
TNFP01375 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TNFP01375 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TNFP01375 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.98■□□□□ 0.95
TNFP01375 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFP01375 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TNFP01375 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFP01375 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFP01375 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.98■□□□□ 0.95
TNFP01375 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.98■□□□□ 0.95
TNFP01375 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
TNFP01375 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.98■□□□□ 0.95
TNFP01375 AC138907.5-202ENST00000569484 235 ntBASIC20.98■□□□□ 0.95
TNFP01375 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TNFP01375 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TNFP01375 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.98■□□□□ 0.95
TNFP01375 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFP01375 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.98■□□□□ 0.95
TNFP01375 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.98■□□□□ 0.95
TNFP01375 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFP01375 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFP01375 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TNFP01375 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
TNFP01375 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.98■□□□□ 0.95
TNFP01375 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFP01375 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFP01375 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TNFP01375 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFP01375 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.97■□□□□ 0.95
TNFP01375 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFP01375 UBE2DNL-204ENST00000602536 740 ntBASIC20.97■□□□□ 0.95
TNFP01375 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFP01375 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFP01375 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.97■□□□□ 0.95
TNFP01375 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFP01375 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFP01375 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms