Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.18■■□□□ 1.46
GGPS1O95749 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
GGPS1O95749 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.18■■□□□ 1.46
GGPS1O95749 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
GGPS1O95749 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
GGPS1O95749 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
GGPS1O95749 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
GGPS1O95749 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
GGPS1O95749 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
GGPS1O95749 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
GGPS1O95749 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
GGPS1O95749 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
GGPS1O95749 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
GGPS1O95749 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
GGPS1O95749 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.17■■□□□ 1.46
GGPS1O95749 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.17■■□□□ 1.46
GGPS1O95749 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24.17■■□□□ 1.46
GGPS1O95749 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.17■■□□□ 1.46
GGPS1O95749 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
GGPS1O95749 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
GGPS1O95749 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.17■■□□□ 1.46
GGPS1O95749 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
GGPS1O95749 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
GGPS1O95749 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.16■■□□□ 1.46
GGPS1O95749 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.16■■□□□ 1.46
GGPS1O95749 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.16■■□□□ 1.46
GGPS1O95749 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.16■■□□□ 1.46
GGPS1O95749 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
GGPS1O95749 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.16■■□□□ 1.46
GGPS1O95749 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.16■■□□□ 1.46
GGPS1O95749 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.16■■□□□ 1.46
GGPS1O95749 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
GGPS1O95749 AC137767.1-201ENST00000602918 1920 ntBASIC24.16■■□□□ 1.46
GGPS1O95749 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
GGPS1O95749 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
GGPS1O95749 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
GGPS1O95749 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
GGPS1O95749 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
GGPS1O95749 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
GGPS1O95749 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
GGPS1O95749 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
GGPS1O95749 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
GGPS1O95749 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
GGPS1O95749 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
GGPS1O95749 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.14■■□□□ 1.45
GGPS1O95749 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.14■■□□□ 1.45
GGPS1O95749 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.14■■□□□ 1.45
GGPS1O95749 AL034346.1-201ENST00000568244 1277 ntBASIC24.14■■□□□ 1.45
GGPS1O95749 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.14■■□□□ 1.45
GGPS1O95749 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
GGPS1O95749 MFSD11-216ENST00000590393 1141 ntBASIC24.14■■□□□ 1.45
GGPS1O95749 AP001160.3-201ENST00000601484 763 ntBASIC24.14■■□□□ 1.45
GGPS1O95749 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.14■■□□□ 1.45
GGPS1O95749 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.14■■□□□ 1.45
GGPS1O95749 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
GGPS1O95749 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
GGPS1O95749 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.14■■□□□ 1.45
GGPS1O95749 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
GGPS1O95749 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
GGPS1O95749 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
GGPS1O95749 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
GGPS1O95749 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
GGPS1O95749 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
GGPS1O95749 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.13■■□□□ 1.45
GGPS1O95749 CROCCP5-201ENST00000436658 830 ntBASIC24.13■■□□□ 1.45
GGPS1O95749 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
GGPS1O95749 UBE2DNL-204ENST00000602536 740 ntBASIC24.13■■□□□ 1.45
GGPS1O95749 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
GGPS1O95749 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
GGPS1O95749 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
GGPS1O95749 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
GGPS1O95749 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
GGPS1O95749 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
GGPS1O95749 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
GGPS1O95749 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
GGPS1O95749 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
GGPS1O95749 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.12■■□□□ 1.45
GGPS1O95749 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
GGPS1O95749 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.12■■□□□ 1.45
GGPS1O95749 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.12■■□□□ 1.45
GGPS1O95749 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.12■■□□□ 1.45
GGPS1O95749 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.12■■□□□ 1.45
GGPS1O95749 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
GGPS1O95749 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.12■■□□□ 1.45
GGPS1O95749 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.12■■□□□ 1.45
GGPS1O95749 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.12■■□□□ 1.45
GGPS1O95749 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
GGPS1O95749 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
GGPS1O95749 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
GGPS1O95749 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
GGPS1O95749 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
GGPS1O95749 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
GGPS1O95749 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.11■■□□□ 1.45
GGPS1O95749 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
GGPS1O95749 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
GGPS1O95749 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
GGPS1O95749 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.11■■□□□ 1.45
GGPS1O95749 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24.11■■□□□ 1.45
GGPS1O95749 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
GGPS1O95749 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms