Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.01■■□□□ 1.59
CTDNEP1O95476 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
CTDNEP1O95476 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CTDNEP1O95476 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CTDNEP1O95476 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.01■■□□□ 1.59
CTDNEP1O95476 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
CTDNEP1O95476 AC244015.2-201ENST00000616358 1861 ntBASIC25■■□□□ 1.59
CTDNEP1O95476 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
CTDNEP1O95476 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25■■□□□ 1.59
CTDNEP1O95476 EDA-201ENST00000338901 1233 ntBASIC25■■□□□ 1.59
CTDNEP1O95476 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25■■□□□ 1.59
CTDNEP1O95476 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25■■□□□ 1.59
CTDNEP1O95476 IGHV3-19-201ENST00000521488 291 ntBASIC25■■□□□ 1.59
CTDNEP1O95476 AC126544.1-201ENST00000580842 1059 ntBASIC25■■□□□ 1.59
CTDNEP1O95476 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25■■□□□ 1.59
CTDNEP1O95476 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25■■□□□ 1.59
CTDNEP1O95476 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CTDNEP1O95476 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
CTDNEP1O95476 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CTDNEP1O95476 MIR939-201ENST00000401314 82 ntBASIC24.99■■□□□ 1.59
CTDNEP1O95476 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
CTDNEP1O95476 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CTDNEP1O95476 AP004607.7-201ENST00000527152 1677 ntBASIC24.99■■□□□ 1.59
CTDNEP1O95476 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CTDNEP1O95476 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.99■■□□□ 1.59
CTDNEP1O95476 AL136967.2-201ENST00000623968 743 ntBASIC24.99■■□□□ 1.59
CTDNEP1O95476 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CTDNEP1O95476 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.98■■□□□ 1.59
CTDNEP1O95476 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
CTDNEP1O95476 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC24.98■■□□□ 1.59
CTDNEP1O95476 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
CTDNEP1O95476 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CTDNEP1O95476 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CTDNEP1O95476 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
CTDNEP1O95476 AF213884.3-201ENST00000563833 479 ntBASIC24.98■■□□□ 1.59
CTDNEP1O95476 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.98■■□□□ 1.59
CTDNEP1O95476 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.98■■□□□ 1.59
CTDNEP1O95476 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CTDNEP1O95476 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CTDNEP1O95476 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CTDNEP1O95476 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CTDNEP1O95476 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.97■■□□□ 1.59
CTDNEP1O95476 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CTDNEP1O95476 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CTDNEP1O95476 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
CTDNEP1O95476 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.97■■□□□ 1.59
CTDNEP1O95476 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CTDNEP1O95476 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CTDNEP1O95476 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.97■■□□□ 1.59
CTDNEP1O95476 SUDS3P1-201ENST00000505831 966 ntBASIC24.97■■□□□ 1.59
CTDNEP1O95476 AC027682.1-201ENST00000562846 899 ntBASIC24.97■■□□□ 1.59
CTDNEP1O95476 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.97■■□□□ 1.59
CTDNEP1O95476 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CTDNEP1O95476 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.97■■□□□ 1.59
CTDNEP1O95476 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CTDNEP1O95476 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CTDNEP1O95476 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.97■■□□□ 1.59
CTDNEP1O95476 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.97■■□□□ 1.59
CTDNEP1O95476 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CTDNEP1O95476 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.96■■□□□ 1.59
CTDNEP1O95476 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CTDNEP1O95476 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
CTDNEP1O95476 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
CTDNEP1O95476 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.96■■□□□ 1.59
CTDNEP1O95476 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.96■■□□□ 1.59
CTDNEP1O95476 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CTDNEP1O95476 AL355001.2-201ENST00000620617 1191 ntBASIC24.96■■□□□ 1.59
CTDNEP1O95476 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CTDNEP1O95476 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CTDNEP1O95476 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.96■■□□□ 1.59
CTDNEP1O95476 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CTDNEP1O95476 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.59
CTDNEP1O95476 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.95■■□□□ 1.59
CTDNEP1O95476 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.95■■□□□ 1.58
CTDNEP1O95476 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.95■■□□□ 1.58
CTDNEP1O95476 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
CTDNEP1O95476 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CTDNEP1O95476 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CTDNEP1O95476 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.95■■□□□ 1.58
CTDNEP1O95476 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.95■■□□□ 1.58
CTDNEP1O95476 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CTDNEP1O95476 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.95■■□□□ 1.58
CTDNEP1O95476 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
CTDNEP1O95476 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
CTDNEP1O95476 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
CTDNEP1O95476 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CTDNEP1O95476 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
CTDNEP1O95476 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.95■■□□□ 1.58
CTDNEP1O95476 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.94■■□□□ 1.58
CTDNEP1O95476 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CTDNEP1O95476 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CTDNEP1O95476 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.94■■□□□ 1.58
CTDNEP1O95476 AL139246.5-201ENST00000606645 996 ntBASIC24.94■■□□□ 1.58
CTDNEP1O95476 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
CTDNEP1O95476 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.94■■□□□ 1.58
CTDNEP1O95476 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.93■■□□□ 1.58
CTDNEP1O95476 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CTDNEP1O95476 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CTDNEP1O95476 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.93■■□□□ 1.58
CTDNEP1O95476 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms