Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.89■□□□□ 0.77
NKX2-2O95096 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.89■□□□□ 0.77
NKX2-2O95096 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
NKX2-2O95096 AC105233.4-201ENST00000642045 216 ntBASIC19.89■□□□□ 0.77
NKX2-2O95096 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX2-2O95096 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX2-2O95096 FBXW4P1-201ENST00000426721 2239 ntBASIC19.88■□□□□ 0.77
NKX2-2O95096 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX2-2O95096 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NKX2-2O95096 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX2-2O95096 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX2-2O95096 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX2-2O95096 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.88■□□□□ 0.77
NKX2-2O95096 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.88■□□□□ 0.77
NKX2-2O95096 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.88■□□□□ 0.77
NKX2-2O95096 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX2-2O95096 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX2-2O95096 AC026471.6-201ENST00000622954 1905 ntBASIC19.88■□□□□ 0.77
NKX2-2O95096 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX2-2O95096 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
NKX2-2O95096 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.88■□□□□ 0.77
NKX2-2O95096 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
NKX2-2O95096 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.87■□□□□ 0.77
NKX2-2O95096 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-2O95096 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-2O95096 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-2O95096 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.87■□□□□ 0.77
NKX2-2O95096 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.87■□□□□ 0.77
NKX2-2O95096 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NKX2-2O95096 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-2O95096 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-2O95096 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-2O95096 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
NKX2-2O95096 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.86■□□□□ 0.77
NKX2-2O95096 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-2O95096 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-2O95096 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-2O95096 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
NKX2-2O95096 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NKX2-2O95096 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-2O95096 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.86■□□□□ 0.77
NKX2-2O95096 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.86■□□□□ 0.77
NKX2-2O95096 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.86■□□□□ 0.77
NKX2-2O95096 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-2O95096 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.86■□□□□ 0.77
NKX2-2O95096 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.85■□□□□ 0.77
NKX2-2O95096 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
NKX2-2O95096 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.85■□□□□ 0.77
NKX2-2O95096 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.85■□□□□ 0.77
NKX2-2O95096 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
NKX2-2O95096 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-2O95096 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.85■□□□□ 0.77
NKX2-2O95096 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-2O95096 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.85■□□□□ 0.77
NKX2-2O95096 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.85■□□□□ 0.77
NKX2-2O95096 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.85■□□□□ 0.77
NKX2-2O95096 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.85■□□□□ 0.77
NKX2-2O95096 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-2O95096 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-2O95096 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
NKX2-2O95096 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-2O95096 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-2O95096 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-2O95096 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-2O95096 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.84■□□□□ 0.77
NKX2-2O95096 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-2O95096 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-2O95096 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
NKX2-2O95096 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.84■□□□□ 0.77
NKX2-2O95096 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.84■□□□□ 0.77
NKX2-2O95096 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-2O95096 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-2O95096 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.84■□□□□ 0.77
NKX2-2O95096 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-2O95096 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-2O95096 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.83■□□□□ 0.77
NKX2-2O95096 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.83■□□□□ 0.77
NKX2-2O95096 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.83■□□□□ 0.77
NKX2-2O95096 AP006587.3-201ENST00000525742 1516 ntBASIC19.83■□□□□ 0.77
NKX2-2O95096 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-2O95096 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-2O95096 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-2O95096 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-2O95096 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.83■□□□□ 0.77
NKX2-2O95096 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-2O95096 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-2O95096 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-2O95096 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-2O95096 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-2O95096 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.82■□□□□ 0.76
NKX2-2O95096 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-2O95096 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-2O95096 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.82■□□□□ 0.76
NKX2-2O95096 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-2O95096 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-2O95096 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-2O95096 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
NKX2-2O95096 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-2O95096 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.82■□□□□ 0.76
NKX2-2O95096 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms