Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GMDSO60547 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
GMDSO60547 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.91■□□□□ 0.62
GMDSO60547 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.91■□□□□ 0.62
GMDSO60547 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GMDSO60547 AC004687.1-201ENST00000579003 1625 ntBASIC18.91■□□□□ 0.62
GMDSO60547 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GMDSO60547 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
GMDSO60547 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.91■□□□□ 0.62
GMDSO60547 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GMDSO60547 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.91■□□□□ 0.62
GMDSO60547 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.91■□□□□ 0.62
GMDSO60547 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GMDSO60547 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GMDSO60547 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.91■□□□□ 0.62
GMDSO60547 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
GMDSO60547 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GMDSO60547 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GMDSO60547 LINC01960-201ENST00000563759 1884 ntBASIC18.9■□□□□ 0.62
GMDSO60547 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
GMDSO60547 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.9■□□□□ 0.62
GMDSO60547 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GMDSO60547 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GMDSO60547 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GMDSO60547 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GMDSO60547 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GMDSO60547 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GMDSO60547 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GMDSO60547 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
GMDSO60547 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
GMDSO60547 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
GMDSO60547 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
GMDSO60547 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GMDSO60547 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GMDSO60547 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.89■□□□□ 0.61
GMDSO60547 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GMDSO60547 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GMDSO60547 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.89■□□□□ 0.61
GMDSO60547 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.89■□□□□ 0.61
GMDSO60547 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.89■□□□□ 0.61
GMDSO60547 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.89■□□□□ 0.61
GMDSO60547 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.89■□□□□ 0.61
GMDSO60547 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GMDSO60547 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GMDSO60547 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GMDSO60547 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GMDSO60547 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
GMDSO60547 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GMDSO60547 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GMDSO60547 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GMDSO60547 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
GMDSO60547 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
GMDSO60547 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GMDSO60547 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GMDSO60547 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GMDSO60547 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GMDSO60547 AL136116.3-201ENST00000402907 1138 ntBASIC18.88■□□□□ 0.61
GMDSO60547 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.88■□□□□ 0.61
GMDSO60547 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
GMDSO60547 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.88■□□□□ 0.61
GMDSO60547 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GMDSO60547 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GMDSO60547 AC010542.4-201ENST00000563151 1910 ntBASIC18.88■□□□□ 0.61
GMDSO60547 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GMDSO60547 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GMDSO60547 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GMDSO60547 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.87■□□□□ 0.61
GMDSO60547 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
GMDSO60547 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.87■□□□□ 0.61
GMDSO60547 AC008406.3-201ENST00000620001 1374 ntBASIC18.87■□□□□ 0.61
GMDSO60547 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
GMDSO60547 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GMDSO60547 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
GMDSO60547 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GMDSO60547 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GMDSO60547 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GMDSO60547 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GMDSO60547 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.86■□□□□ 0.61
GMDSO60547 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GMDSO60547 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GMDSO60547 AC092667.1-201ENST00000434301 2586 ntBASIC18.86■□□□□ 0.61
GMDSO60547 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GMDSO60547 AC006455.2-201ENST00000429931 906 ntBASIC18.86■□□□□ 0.61
GMDSO60547 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.86■□□□□ 0.61
GMDSO60547 AL138724.1-201ENST00000606771 1088 ntBASIC18.86■□□□□ 0.61
GMDSO60547 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.86■□□□□ 0.61
GMDSO60547 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GMDSO60547 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GMDSO60547 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GMDSO60547 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GMDSO60547 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
GMDSO60547 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.85■□□□□ 0.61
GMDSO60547 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GMDSO60547 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GMDSO60547 pRNA.6-201ENST00000610482 90 ntBASIC18.85■□□□□ 0.61
GMDSO60547 pRNA.5-201ENST00000612139 90 ntBASIC18.85■□□□□ 0.61
GMDSO60547 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.85■□□□□ 0.61
GMDSO60547 pRNA.11-201ENST00000618423 90 ntBASIC18.85■□□□□ 0.61
GMDSO60547 pRNA.13-201ENST00000619112 90 ntBASIC18.85■□□□□ 0.61
GMDSO60547 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms