Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
GDF9O60383 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GDF9O60383 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GDF9O60383 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.11■□□□□ 0.97
GDF9O60383 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
GDF9O60383 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
GDF9O60383 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
GDF9O60383 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.11■□□□□ 0.97
GDF9O60383 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.11■□□□□ 0.97
GDF9O60383 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.11■□□□□ 0.97
GDF9O60383 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.11■□□□□ 0.97
GDF9O60383 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.1■□□□□ 0.97
GDF9O60383 LINC01124-201ENST00000409786 2117 ntBASIC21.1■□□□□ 0.97
GDF9O60383 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
GDF9O60383 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
GDF9O60383 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GDF9O60383 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDF9O60383 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.1■□□□□ 0.97
GDF9O60383 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.1■□□□□ 0.97
GDF9O60383 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.1■□□□□ 0.97
GDF9O60383 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
GDF9O60383 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDF9O60383 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDF9O60383 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.1■□□□□ 0.97
GDF9O60383 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDF9O60383 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDF9O60383 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.09■□□□□ 0.97
GDF9O60383 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
GDF9O60383 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.09■□□□□ 0.97
GDF9O60383 AC079630.1-202ENST00000618127 1840 ntBASIC21.09■□□□□ 0.97
GDF9O60383 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.09■□□□□ 0.97
GDF9O60383 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDF9O60383 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.09■□□□□ 0.97
GDF9O60383 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GDF9O60383 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
GDF9O60383 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDF9O60383 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDF9O60383 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.09■□□□□ 0.97
GDF9O60383 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.09■□□□□ 0.97
GDF9O60383 AC138907.5-202ENST00000569484 235 ntBASIC21.09■□□□□ 0.97
GDF9O60383 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.09■□□□□ 0.97
GDF9O60383 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.09■□□□□ 0.97
GDF9O60383 AC008694.1-202ENST00000636953 945 ntBASIC21.09■□□□□ 0.97
GDF9O60383 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
GDF9O60383 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
GDF9O60383 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GDF9O60383 AL512625.2-201ENST00000417533 625 ntBASIC21.08■□□□□ 0.97
GDF9O60383 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.08■□□□□ 0.97
GDF9O60383 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.08■□□□□ 0.97
GDF9O60383 AC073648.6-201ENST00000641589 218 ntBASIC21.08■□□□□ 0.97
GDF9O60383 DUSP8P5-201ENST00000422884 1815 ntBASIC21.08■□□□□ 0.96
GDF9O60383 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
GDF9O60383 AC055733.4-201ENST00000638462 1354 ntBASIC21.08■□□□□ 0.96
GDF9O60383 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
GDF9O60383 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GDF9O60383 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.07■□□□□ 0.96
GDF9O60383 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.07■□□□□ 0.96
GDF9O60383 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF9O60383 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF9O60383 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF9O60383 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GDF9O60383 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GDF9O60383 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.07■□□□□ 0.96
GDF9O60383 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.07■□□□□ 0.96
GDF9O60383 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.07■□□□□ 0.96
GDF9O60383 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
GDF9O60383 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.06■□□□□ 0.96
GDF9O60383 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDF9O60383 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDF9O60383 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GDF9O60383 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDF9O60383 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.06■□□□□ 0.96
GDF9O60383 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.06■□□□□ 0.96
GDF9O60383 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.06■□□□□ 0.96
GDF9O60383 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.06■□□□□ 0.96
GDF9O60383 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.06■□□□□ 0.96
GDF9O60383 AC010331.1-201ENST00000611423 582 ntBASIC21.06■□□□□ 0.96
GDF9O60383 ABCB10P4-201ENST00000566803 2184 ntBASIC21.06■□□□□ 0.96
GDF9O60383 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDF9O60383 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDF9O60383 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDF9O60383 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDF9O60383 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.05■□□□□ 0.96
GDF9O60383 FAM210CP-201ENST00000445714 574 ntBASIC21.05■□□□□ 0.96
GDF9O60383 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
GDF9O60383 AC091874.3-201ENST00000512672 1195 ntBASIC21.05■□□□□ 0.96
GDF9O60383 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.05■□□□□ 0.96
GDF9O60383 AC069236.1-201ENST00000604339 616 ntBASIC21.05■□□□□ 0.96
GDF9O60383 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.05■□□□□ 0.96
GDF9O60383 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.05■□□□□ 0.96
GDF9O60383 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.05■□□□□ 0.96
GDF9O60383 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDF9O60383 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDF9O60383 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GDF9O60383 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.04■□□□□ 0.96
GDF9O60383 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDF9O60383 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDF9O60383 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.04■□□□□ 0.96
GDF9O60383 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GDF9O60383 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms