Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LCMT2O60294 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.59■□□□□ 0.89
LCMT2O60294 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.59■□□□□ 0.89
LCMT2O60294 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCMT2O60294 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LCMT2O60294 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCMT2O60294 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCMT2O60294 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LCMT2O60294 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCMT2O60294 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.58■□□□□ 0.89
LCMT2O60294 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCMT2O60294 C11orf96-202ENST00000528572 1834 ntBASIC20.58■□□□□ 0.89
LCMT2O60294 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCMT2O60294 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCMT2O60294 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCMT2O60294 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.58■□□□□ 0.89
LCMT2O60294 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.58■□□□□ 0.89
LCMT2O60294 AC026471.6-201ENST00000622954 1905 ntBASIC20.58■□□□□ 0.88
LCMT2O60294 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LCMT2O60294 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.88
LCMT2O60294 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LCMT2O60294 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LCMT2O60294 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCMT2O60294 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCMT2O60294 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
LCMT2O60294 AC079834.2-201ENST00000609776 1949 ntBASIC20.57■□□□□ 0.88
LCMT2O60294 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCMT2O60294 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LCMT2O60294 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCMT2O60294 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LCMT2O60294 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCMT2O60294 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCMT2O60294 FAM99A-202ENST00000538190 1989 ntBASIC20.57■□□□□ 0.88
LCMT2O60294 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCMT2O60294 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LCMT2O60294 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LCMT2O60294 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCMT2O60294 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LCMT2O60294 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCMT2O60294 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LCMT2O60294 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCMT2O60294 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCMT2O60294 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCMT2O60294 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.56■□□□□ 0.88
LCMT2O60294 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LCMT2O60294 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LCMT2O60294 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.55■□□□□ 0.88
LCMT2O60294 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCMT2O60294 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LCMT2O60294 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCMT2O60294 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LCMT2O60294 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.55■□□□□ 0.88
LCMT2O60294 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.55■□□□□ 0.88
LCMT2O60294 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LCMT2O60294 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCMT2O60294 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LCMT2O60294 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LCMT2O60294 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.55■□□□□ 0.88
LCMT2O60294 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LCMT2O60294 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCMT2O60294 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LCMT2O60294 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LCMT2O60294 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LCMT2O60294 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LCMT2O60294 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LCMT2O60294 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LCMT2O60294 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LCMT2O60294 AC027612.3-201ENST00000413684 1047 ntBASIC20.54■□□□□ 0.88
LCMT2O60294 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.54■□□□□ 0.88
LCMT2O60294 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.54■□□□□ 0.88
LCMT2O60294 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.54■□□□□ 0.88
LCMT2O60294 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.54■□□□□ 0.88
LCMT2O60294 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.54■□□□□ 0.88
LCMT2O60294 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LCMT2O60294 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCMT2O60294 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCMT2O60294 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCMT2O60294 AL034346.1-201ENST00000568244 1277 ntBASIC20.53■□□□□ 0.88
LCMT2O60294 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.53■□□□□ 0.88
LCMT2O60294 TPRG1LP1-201ENST00000598702 760 ntBASIC20.53■□□□□ 0.88
LCMT2O60294 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LCMT2O60294 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LCMT2O60294 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCMT2O60294 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LCMT2O60294 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LCMT2O60294 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LCMT2O60294 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LCMT2O60294 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
LCMT2O60294 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
LCMT2O60294 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LCMT2O60294 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.52■□□□□ 0.88
LCMT2O60294 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LCMT2O60294 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.52■□□□□ 0.88
LCMT2O60294 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LCMT2O60294 AC009237.3-201ENST00000393279 1427 ntBASIC20.52■□□□□ 0.87
LCMT2O60294 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.87
LCMT2O60294 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
LCMT2O60294 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.51■□□□□ 0.87
LCMT2O60294 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
LCMT2O60294 AC005224.4-201ENST00000583262 1652 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms