Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM38O00635 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM38O00635 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.57■■□□□ 1.04
TRIM38O00635 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.57■■□□□ 1.04
TRIM38O00635 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM38O00635 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.57■■□□□ 1.04
TRIM38O00635 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM38O00635 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.57■■□□□ 1.04
TRIM38O00635 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM38O00635 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM38O00635 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TRIM38O00635 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM38O00635 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TRIM38O00635 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
TRIM38O00635 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM38O00635 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM38O00635 ESRRAP2-201ENST00000418437 1549 ntBASIC21.56■■□□□ 1.04
TRIM38O00635 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM38O00635 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM38O00635 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM38O00635 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM38O00635 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TRIM38O00635 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM38O00635 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM38O00635 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM38O00635 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM38O00635 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM38O00635 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM38O00635 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM38O00635 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM38O00635 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM38O00635 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM38O00635 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM38O00635 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM38O00635 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM38O00635 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM38O00635 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.55■■□□□ 1.04
TRIM38O00635 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM38O00635 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM38O00635 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM38O00635 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM38O00635 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM38O00635 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM38O00635 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM38O00635 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM38O00635 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM38O00635 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM38O00635 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM38O00635 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM38O00635 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM38O00635 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM38O00635 KRT18P61-201ENST00000585825 1298 ntBASIC21.54■■□□□ 1.04
TRIM38O00635 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
TRIM38O00635 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM38O00635 AL024507.2-201ENST00000606070 2574 ntBASIC21.54■■□□□ 1.04
TRIM38O00635 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.54■■□□□ 1.04
TRIM38O00635 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM38O00635 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM38O00635 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM38O00635 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM38O00635 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.53■■□□□ 1.04
TRIM38O00635 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TRIM38O00635 ID1-201ENST00000376105 1233 ntBASIC21.53■■□□□ 1.04
TRIM38O00635 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.53■■□□□ 1.04
TRIM38O00635 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.53■■□□□ 1.04
TRIM38O00635 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.53■■□□□ 1.04
TRIM38O00635 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.53■■□□□ 1.04
TRIM38O00635 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TRIM38O00635 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM38O00635 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.52■■□□□ 1.04
TRIM38O00635 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.52■■□□□ 1.04
TRIM38O00635 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM38O00635 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TRIM38O00635 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.52■■□□□ 1.04
TRIM38O00635 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.52■■□□□ 1.04
TRIM38O00635 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM38O00635 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TRIM38O00635 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.52■■□□□ 1.04
TRIM38O00635 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TRIM38O00635 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM38O00635 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM38O00635 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.52■■□□□ 1.03
TRIM38O00635 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.52■■□□□ 1.03
TRIM38O00635 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM38O00635 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM38O00635 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TRIM38O00635 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM38O00635 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM38O00635 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TRIM38O00635 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM38O00635 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM38O00635 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM38O00635 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM38O00635 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM38O00635 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM38O00635 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM38O00635 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM38O00635 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM38O00635 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM38O00635 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms