Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 LINC00526-201ENST00000581067 1875 ntBASIC21.05■□□□□ 0.96
TMX2-CTNND1H3BSU7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMX2-CTNND1H3BSU7 KRT19P1-201ENST00000405746 1186 ntBASIC21.05■□□□□ 0.96
TMX2-CTNND1H3BSU7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TMX2-CTNND1H3BSU7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMX2-CTNND1H3BSU7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TMX2-CTNND1H3BSU7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMX2-CTNND1H3BSU7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMX2-CTNND1H3BSU7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
TMX2-CTNND1H3BSU7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
TMX2-CTNND1H3BSU7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.04■□□□□ 0.96
TMX2-CTNND1H3BSU7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.04■□□□□ 0.96
TMX2-CTNND1H3BSU7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TMX2-CTNND1H3BSU7 AC010141.3-201ENST00000456659 717 ntBASIC21.04■□□□□ 0.96
TMX2-CTNND1H3BSU7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.04■□□□□ 0.96
TMX2-CTNND1H3BSU7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMX2-CTNND1H3BSU7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.04■□□□□ 0.96
TMX2-CTNND1H3BSU7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.04■□□□□ 0.96
TMX2-CTNND1H3BSU7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMX2-CTNND1H3BSU7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TMX2-CTNND1H3BSU7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TMX2-CTNND1H3BSU7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMX2-CTNND1H3BSU7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMX2-CTNND1H3BSU7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMX2-CTNND1H3BSU7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMX2-CTNND1H3BSU7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TMX2-CTNND1H3BSU7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMX2-CTNND1H3BSU7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.03■□□□□ 0.96
TMX2-CTNND1H3BSU7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.03■□□□□ 0.96
TMX2-CTNND1H3BSU7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.03■□□□□ 0.96
TMX2-CTNND1H3BSU7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMX2-CTNND1H3BSU7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMX2-CTNND1H3BSU7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMX2-CTNND1H3BSU7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMX2-CTNND1H3BSU7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMX2-CTNND1H3BSU7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
TMX2-CTNND1H3BSU7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMX2-CTNND1H3BSU7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMX2-CTNND1H3BSU7 AC137767.1-201ENST00000602918 1920 ntBASIC21.02■□□□□ 0.96
TMX2-CTNND1H3BSU7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TMX2-CTNND1H3BSU7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.02■□□□□ 0.96
TMX2-CTNND1H3BSU7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TMX2-CTNND1H3BSU7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.02■□□□□ 0.96
TMX2-CTNND1H3BSU7 KRT18P11-201ENST00000435214 1283 ntBASIC21.02■□□□□ 0.96
TMX2-CTNND1H3BSU7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TMX2-CTNND1H3BSU7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMX2-CTNND1H3BSU7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.02■□□□□ 0.96
TMX2-CTNND1H3BSU7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TMX2-CTNND1H3BSU7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMX2-CTNND1H3BSU7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMX2-CTNND1H3BSU7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
TMX2-CTNND1H3BSU7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.01■□□□□ 0.95
TMX2-CTNND1H3BSU7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 DBI-210ENST00000542275 757 ntTSL 5 BASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 BID-214ENST00000617586 542 ntTSL 5 BASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 AP004607.4-201ENST00000530158 1459 ntBASIC21■□□□□ 0.95
TMX2-CTNND1H3BSU7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms