Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.16■□□□□ 0.34
CGB1A6NKQ9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CGB1A6NKQ9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 AL138724.1-201ENST00000606771 1088 ntBASIC17.15■□□□□ 0.34
CGB1A6NKQ9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 SYT6-210ENST00000641643 1587 ntBASIC17.15■□□□□ 0.34
CGB1A6NKQ9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CGB1A6NKQ9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CGB1A6NKQ9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.14■□□□□ 0.33
CGB1A6NKQ9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CGB1A6NKQ9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.14■□□□□ 0.33
CGB1A6NKQ9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CGB1A6NKQ9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CGB1A6NKQ9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CGB1A6NKQ9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CGB1A6NKQ9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CGB1A6NKQ9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CGB1A6NKQ9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.14■□□□□ 0.33
CGB1A6NKQ9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.14■□□□□ 0.33
CGB1A6NKQ9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CGB1A6NKQ9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CGB1A6NKQ9 OR7E47P-201ENST00000546390 1422 ntBASIC17.13■□□□□ 0.33
CGB1A6NKQ9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CGB1A6NKQ9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CGB1A6NKQ9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CGB1A6NKQ9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.13■□□□□ 0.33
CGB1A6NKQ9 AC010141.3-201ENST00000456659 717 ntBASIC17.13■□□□□ 0.33
CGB1A6NKQ9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.13■□□□□ 0.33
CGB1A6NKQ9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.13■□□□□ 0.33
CGB1A6NKQ9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.13■□□□□ 0.33
CGB1A6NKQ9 AC136469.2-201ENST00000623944 1028 ntBASIC17.13■□□□□ 0.33
CGB1A6NKQ9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.13■□□□□ 0.33
CGB1A6NKQ9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CGB1A6NKQ9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CGB1A6NKQ9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CGB1A6NKQ9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CGB1A6NKQ9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CGB1A6NKQ9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CGB1A6NKQ9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 AC244015.2-201ENST00000616358 1861 ntBASIC17.12■□□□□ 0.33
CGB1A6NKQ9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 DUX4L19-201ENST00000557448 1267 ntBASIC17.12■□□□□ 0.33
CGB1A6NKQ9 AC011298.3-201ENST00000615796 283 ntBASIC17.12■□□□□ 0.33
CGB1A6NKQ9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CGB1A6NKQ9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CGB1A6NKQ9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CGB1A6NKQ9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CGB1A6NKQ9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CGB1A6NKQ9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CGB1A6NKQ9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CGB1A6NKQ9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CGB1A6NKQ9 SLC47A1P1-202ENST00000449666 945 ntBASIC17.11■□□□□ 0.33
CGB1A6NKQ9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CGB1A6NKQ9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.11■□□□□ 0.33
CGB1A6NKQ9 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.11■□□□□ 0.33
CGB1A6NKQ9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CGB1A6NKQ9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CGB1A6NKQ9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CGB1A6NKQ9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms