Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
CCDC66A2RUB6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
CCDC66A2RUB6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CCDC66A2RUB6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC66A2RUB6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CCDC66A2RUB6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC66A2RUB6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC66A2RUB6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
CCDC66A2RUB6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
CCDC66A2RUB6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.07■■□□□ 1.28
CCDC66A2RUB6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC66A2RUB6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.07■■□□□ 1.28
CCDC66A2RUB6 LINC01960-201ENST00000563759 1884 ntBASIC23.07■■□□□ 1.28
CCDC66A2RUB6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 AC009102.2-201ENST00000606772 1639 ntBASIC23.06■■□□□ 1.28
CCDC66A2RUB6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.06■■□□□ 1.28
CCDC66A2RUB6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
CCDC66A2RUB6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CCDC66A2RUB6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.05■■□□□ 1.28
CCDC66A2RUB6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC66A2RUB6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC23.05■■□□□ 1.28
CCDC66A2RUB6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC66A2RUB6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.05■■□□□ 1.28
CCDC66A2RUB6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.05■■□□□ 1.28
CCDC66A2RUB6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CCDC66A2RUB6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.05■■□□□ 1.28
CCDC66A2RUB6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
CCDC66A2RUB6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC66A2RUB6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.05■■□□□ 1.28
CCDC66A2RUB6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC66A2RUB6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC66A2RUB6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC66A2RUB6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC66A2RUB6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC66A2RUB6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CCDC66A2RUB6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
CCDC66A2RUB6 MTDHP2-201ENST00000601468 714 ntBASIC23.04■■□□□ 1.28
CCDC66A2RUB6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.04■■□□□ 1.28
CCDC66A2RUB6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC23.04■■□□□ 1.28
CCDC66A2RUB6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC66A2RUB6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC66A2RUB6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.04■■□□□ 1.28
CCDC66A2RUB6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC66A2RUB6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CCDC66A2RUB6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC23.03■■□□□ 1.28
CCDC66A2RUB6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CCDC66A2RUB6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CCDC66A2RUB6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CCDC66A2RUB6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.03■■□□□ 1.28
CCDC66A2RUB6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC66A2RUB6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC66A2RUB6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC66A2RUB6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CCDC66A2RUB6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC66A2RUB6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC66A2RUB6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC66A2RUB6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC66A2RUB6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC66A2RUB6 LINC01521-201ENST00000504184 1943 ntBASIC23.02■■□□□ 1.28
CCDC66A2RUB6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.02■■□□□ 1.28
CCDC66A2RUB6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC66A2RUB6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC66A2RUB6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC66A2RUB6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.02■■□□□ 1.28
CCDC66A2RUB6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC66A2RUB6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC66A2RUB6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CCDC66A2RUB6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC66A2RUB6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC66A2RUB6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC66A2RUB6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.01■■□□□ 1.27
CCDC66A2RUB6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC66A2RUB6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC66A2RUB6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC66A2RUB6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC66A2RUB6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC66A2RUB6 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.01■■□□□ 1.27
CCDC66A2RUB6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC66A2RUB6 MIR4787-201ENST00000607364 84 ntBASIC23.01■■□□□ 1.27
CCDC66A2RUB6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.01■■□□□ 1.27
CCDC66A2RUB6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC66A2RUB6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23■■□□□ 1.27
CCDC66A2RUB6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC66A2RUB6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms