Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV3S1A0A5B6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.14■□□□□ 0.81
TCRBV3S1A0A5B6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.14■□□□□ 0.81
TCRBV3S1A0A5B6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.14■□□□□ 0.81
TCRBV3S1A0A5B6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV3S1A0A5B6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
TCRBV3S1A0A5B6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV3S1A0A5B6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV3S1A0A5B6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV3S1A0A5B6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV3S1A0A5B6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV3S1A0A5B6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.13■□□□□ 0.81
TCRBV3S1A0A5B6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TCRBV3S1A0A5B6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV3S1A0A5B6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.13■□□□□ 0.81
TCRBV3S1A0A5B6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TCRBV3S1A0A5B6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV3S1A0A5B6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV3S1A0A5B6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.13■□□□□ 0.81
TCRBV3S1A0A5B6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV3S1A0A5B6 AL049796.1-201ENST00000565336 1766 ntBASIC20.13■□□□□ 0.81
TCRBV3S1A0A5B6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.13■□□□□ 0.81
TCRBV3S1A0A5B6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 MIR6722-201ENST00000617286 78 ntBASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV3S1A0A5B6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV3S1A0A5B6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.11■□□□□ 0.81
TCRBV3S1A0A5B6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TCRBV3S1A0A5B6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV3S1A0A5B6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.11■□□□□ 0.81
TCRBV3S1A0A5B6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV3S1A0A5B6 RARRES2P2-201ENST00000394842 485 ntBASIC20.11■□□□□ 0.81
TCRBV3S1A0A5B6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.11■□□□□ 0.81
TCRBV3S1A0A5B6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.11■□□□□ 0.81
TCRBV3S1A0A5B6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.11■□□□□ 0.81
TCRBV3S1A0A5B6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV3S1A0A5B6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.11■□□□□ 0.81
TCRBV3S1A0A5B6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TCRBV3S1A0A5B6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV3S1A0A5B6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
TCRBV3S1A0A5B6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
TCRBV3S1A0A5B6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.1■□□□□ 0.81
TCRBV3S1A0A5B6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCRBV3S1A0A5B6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCRBV3S1A0A5B6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCRBV3S1A0A5B6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCRBV3S1A0A5B6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCRBV3S1A0A5B6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.1■□□□□ 0.81
TCRBV3S1A0A5B6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCRBV3S1A0A5B6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCRBV3S1A0A5B6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCRBV3S1A0A5B6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.1■□□□□ 0.81
TCRBV3S1A0A5B6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 GABARAPL3-202ENST00000624044 1851 ntBASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 AC079089.2-201ENST00000531211 1277 ntBASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 AC074183.2-201ENST00000623112 922 ntBASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV3S1A0A5B6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV3S1A0A5B6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV3S1A0A5B6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.08■□□□□ 0.8
TCRBV3S1A0A5B6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TCRBV3S1A0A5B6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.08■□□□□ 0.8
TCRBV3S1A0A5B6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TCRBV3S1A0A5B6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.08■□□□□ 0.8
TCRBV3S1A0A5B6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV3S1A0A5B6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV3S1A0A5B6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV3S1A0A5B6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV3S1A0A5B6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.07■□□□□ 0.8
TCRBV3S1A0A5B6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV3S1A0A5B6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV3S1A0A5B6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.07■□□□□ 0.8
TCRBV3S1A0A5B6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms