Protein–RNA interactions for Protein: A0A0K0K1E9

TRBV7-7, T-cell receptor beta variable 7-7 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-7A0A0K0K1E9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 AC092296.2-201ENST00000589470 999 ntBASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 AC079630.1-202ENST00000618127 1840 ntBASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC13.6□□□□□ -0.23
TRBV7-7A0A0K0K1E9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 AC138932.1-201ENST00000534164 6830 ntBASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 ECEL1P2-201ENST00000461596 1295 ntBASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV7-7A0A0K0K1E9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV7-7A0A0K0K1E9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV7-7A0A0K0K1E9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
TRBV7-7A0A0K0K1E9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC13.58□□□□□ -0.23
TRBV7-7A0A0K0K1E9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV7-7A0A0K0K1E9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV7-7A0A0K0K1E9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 AC093536.1-201ENST00000569153 554 ntBASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 NOC2LP1-202ENST00000452600 2235 ntBASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 LTB4R2-202ENST00000528054 3092 ntBASIC13.58□□□□□ -0.24
TRBV7-7A0A0K0K1E9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV7-7A0A0K0K1E9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV7-7A0A0K0K1E9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV7-7A0A0K0K1E9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
TRBV7-7A0A0K0K1E9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV7-7A0A0K0K1E9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms