Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 AC142086.2-201ENST00000569753 217 ntBASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV17A0A0B4J275 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV17A0A0B4J275 TSPY6P-201ENST00000448518 926 ntBASIC19.5■□□□□ 0.71
TRAV17A0A0B4J275 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAV17A0A0B4J275 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAV17A0A0B4J275 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAV17A0A0B4J275 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
TRAV17A0A0B4J275 AC010536.3-201ENST00000620306 533 ntBASIC19.5■□□□□ 0.71
TRAV17A0A0B4J275 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV17A0A0B4J275 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.5■□□□□ 0.71
TRAV17A0A0B4J275 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.49■□□□□ 0.71
TRAV17A0A0B4J275 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAV17A0A0B4J275 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAV17A0A0B4J275 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.49■□□□□ 0.71
TRAV17A0A0B4J275 SLC29A4P1-201ENST00000398760 971 ntBASIC19.49■□□□□ 0.71
TRAV17A0A0B4J275 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV17A0A0B4J275 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV17A0A0B4J275 AC053503.5-201ENST00000601508 636 ntBASIC19.49■□□□□ 0.71
TRAV17A0A0B4J275 AP006587.3-201ENST00000525742 1516 ntBASIC19.49■□□□□ 0.71
TRAV17A0A0B4J275 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAV17A0A0B4J275 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV17A0A0B4J275 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRAV17A0A0B4J275 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV17A0A0B4J275 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV17A0A0B4J275 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV17A0A0B4J275 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV17A0A0B4J275 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
TRAV17A0A0B4J275 EEF1DP3-203ENST00000566025 782 ntBASIC19.48■□□□□ 0.71
TRAV17A0A0B4J275 SLC7A5P1-201ENST00000568957 537 ntBASIC19.48■□□□□ 0.71
TRAV17A0A0B4J275 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAV17A0A0B4J275 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAV17A0A0B4J275 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV17A0A0B4J275 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV17A0A0B4J275 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAV17A0A0B4J275 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV17A0A0B4J275 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV17A0A0B4J275 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRAV17A0A0B4J275 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV17A0A0B4J275 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV17A0A0B4J275 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAV17A0A0B4J275 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
TRAV17A0A0B4J275 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.47■□□□□ 0.71
TRAV17A0A0B4J275 SLC7A5P2-201ENST00000553010 536 ntBASIC19.47■□□□□ 0.71
TRAV17A0A0B4J275 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAV17A0A0B4J275 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TRAV17A0A0B4J275 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.47■□□□□ 0.71
TRAV17A0A0B4J275 AC013268.1-206ENST00000638368 961 ntBASIC19.47■□□□□ 0.71
TRAV17A0A0B4J275 AC112229.1-201ENST00000639295 961 ntBASIC19.47■□□□□ 0.71
TRAV17A0A0B4J275 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAV17A0A0B4J275 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV17A0A0B4J275 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV17A0A0B4J275 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 CNN2P6-201ENST00000439038 900 ntBASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 AF201337.1-201ENST00000520239 748 ntBASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV17A0A0B4J275 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms